Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3304

Experiment: Hydroxylamine 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxylamine 0.5 M
3,813,610	-		Pf6N2E2_3303	0.60	-1.9
3,813,610	-		Pf6N2E2_3303	0.60	-1.3
3,813,719	+		Pf6N2E2_3303	0.68	+0.2
3,813,720	-		Pf6N2E2_3303	0.68	-1.5
3,813,801	-		Pf6N2E2_3303	0.75	-0.7
3,813,801	-		Pf6N2E2_3303	0.75	-0.7
3,813,804	-		Pf6N2E2_3303	0.75	-0.2
3,814,011	-				-1.0
3,814,159	+				+1.6
3,814,159	+				-2.3
3,814,160	-				+4.7
3,814,160	-				+4.7
3,814,160	-				+4.3
3,814,384	+				-0.9
3,814,384	+				-3.1
3,814,385	-				+4.0
3,814,385	-				+4.1
3,814,385	-				+5.6
3,814,385	-				+3.4
3,814,390	+				-2.4
3,814,390	+				+1.7
3,814,390	+				-2.2
3,814,390	+				-2.6
3,814,390	+				-0.8
3,814,391	-				+4.0
3,814,392	+				-1.0
3,814,392	+				-2.1
3,814,392	+				-0.5
3,814,392	+				+0.5
3,814,392	+				-0.7
3,814,393	-				+3.9
3,814,393	-				+4.7
3,814,393	-				+3.7
3,814,393	-				+4.1
3,814,393	-				+5.4
3,814,393	-				+3.3
3,814,401	+				-0.9
3,814,401	+				-3.3
3,814,401	+				-0.9
3,814,401	+				-0.8
3,814,401	+				-1.2
3,814,402	-				+3.2
3,814,421	+				-1.1
3,814,421	+				-2.4
3,814,422	-				+3.1
3,814,428	+				-1.9
3,814,429	-				+3.9
3,814,429	-				+3.9
3,814,429	-				+4.5
3,814,429	-				+3.0
3,814,436	+				-0.4
3,814,580	+		Pf6N2E2_3304	0.13	+0.8
3,814,581	-		Pf6N2E2_3304	0.13	+2.4
3,814,581	-		Pf6N2E2_3304	0.13	+3.2
3,814,581	-		Pf6N2E2_3304	0.13	+3.0
3,814,581	-		Pf6N2E2_3304	0.13	+4.5
3,814,581	-		Pf6N2E2_3304	0.13	+3.5
3,814,581	-		Pf6N2E2_3304	0.13	+3.8
3,814,650	-		Pf6N2E2_3304	0.22	+3.4
3,814,650	-		Pf6N2E2_3304	0.22	+2.6
3,814,719	+		Pf6N2E2_3304	0.32	+1.9
3,814,719	+		Pf6N2E2_3304	0.32	-0.2
3,814,720	-		Pf6N2E2_3304	0.32	+3.5
3,814,776	-		Pf6N2E2_3304	0.40	+2.9
3,814,784	+		Pf6N2E2_3304	0.41	+1.0
3,814,785	-		Pf6N2E2_3304	0.41	+3.3
3,814,785	-		Pf6N2E2_3304	0.41	+4.8
3,814,785	-		Pf6N2E2_3304	0.41	+0.9
3,814,785	-		Pf6N2E2_3304	0.41	+3.2
3,814,785	-		Pf6N2E2_3304	0.41	+3.9
3,814,790	-		Pf6N2E2_3304	0.42	+3.4
3,815,031	-		Pf6N2E2_3304	0.75	+1.9
3,815,056	+		Pf6N2E2_3304	0.79	-2.7
3,815,057	-		Pf6N2E2_3304	0.79	-0.9
3,815,204	+				+1.0
3,815,204	+				+0.8
3,815,204	+				+0.6
3,815,204	+				-1.8
3,815,204	+				-3.0
3,815,204	+				+0.3
3,815,204	+				+0.8
3,815,205	-				+0.7
3,815,205	-				-0.2
3,815,205	-				+0.4
3,815,205	-				+0.2
3,815,208	+				-1.3
3,815,208	+				+0.4
3,815,208	+				-1.7
3,815,208	+				+0.7
3,815,208	+				+1.5
3,815,209	-				+2.0
3,815,317	-				-0.9
3,815,317	-				-2.4
3,815,343	+				-2.6
3,815,343	+				-0.4
3,815,344	-				-0.4
3,815,344	-				-2.9
3,815,344	-				-0.8
3,815,422	+				+0.6
3,815,422	+				+2.0
3,815,422	+				-0.5
3,815,422	+				+1.2
3,815,422	+				+1.7
3,815,423	-				-1.3
3,815,423	-				-2.6
3,815,423	-				-1.6
3,815,423	-				-2.3
3,815,577	+		Pf6N2E2_3305	0.40	-1.2
3,815,698	+		Pf6N2E2_3305	0.70	+0.2
3,815,699	-		Pf6N2E2_3305	0.71	+0.2
3,815,739	+		Pf6N2E2_3305	0.81	-1.2
3,815,807	+				+0.8
3,815,807	+				-1.4
3,815,808	-				-2.6
3,815,808	-				+1.5
3,815,808	-				-1.9
3,815,821	+				+3.0
3,815,821	+				+0.5
3,815,821	+				+0.6
3,815,825	+				+0.7
3,815,825	+				+0.1
3,815,825	+				-1.8
3,815,826	-				-2.1
3,815,829	+				+1.1
3,815,830	-				+0.2
3,815,830	-				-1.7
3,815,909	+				-0.6
3,815,909	+				-2.8
3,815,909	+				-0.9
3,815,909	+				+0.0
3,815,909	+				-0.2
3,815,910	-				+0.5
3,815,910	-				-2.4
3,815,953	-				-2.3
3,815,961	+				-0.3
3,815,961	+				-0.2
3,815,961	+				+1.7
3,815,961	+				-1.3
3,815,961	+				+0.6
3,815,962	-				+1.4
3,815,962	-				+1.6
3,815,962	-				-0.1
3,815,964	+				-3.0
3,815,964	+				+0.5
3,815,964	+				+0.8
3,815,964	+				+0.2
3,815,964	+				-0.0
3,815,965	-				+1.5
3,815,965	-				-3.6
3,815,992	+				-0.4
3,815,992	+				+0.2
3,815,992	+				-1.5
3,815,993	-				+0.7
3,815,993	-				+0.3
3,815,993	-				-1.7
3,816,000	+				-0.2
3,816,000	+				-1.7
3,816,000	+				-1.2
3,816,000	+				+2.2
3,816,000	+				-1.8
3,816,001	-				-0.2
3,816,001	-				-0.7
3,816,001	-				-0.7
3,816,001	-				-2.7
3,816,001	-				-2.8
3,816,017	+				+0.7
3,816,017	+				+2.3
3,816,017	+				-0.2
3,816,018	-				-1.2
3,816,018	-				-0.5
3,816,018	-				-0.8
3,816,020	+				+1.9
3,816,071	+				+0.7
3,816,071	+				-1.0
3,816,072	-				-0.1
3,816,099	+				-0.2
3,816,099	+				-0.3
3,816,099	+				-1.8
3,816,099	+				-1.9
3,816,100	-				-3.0
3,816,100	-				+0.3
3,816,100	-				-0.8
3,816,100	-				-0.3
3,816,100	-				-2.8
3,816,100	-				-2.7
3,816,159	+				-1.1
3,816,159	+				+1.0
3,816,160	-				-3.0
3,816,160	-				-0.2
3,816,160	-				-0.8
3,816,160	-				+0.5