Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1754
Experiment: Hydroxylamine 0.5 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Hydroxylamine 0.5 M |
---|---|---|---|---|---|
remove | |||||
2,071,649 | - | +3.2 | |||
2,071,703 | - | -1.0 | |||
2,071,940 | - | +0.8 | |||
2,071,989 | - | +1.0 | |||
2,072,182 | + | +2.0 | |||
2,072,321 | + | -0.3 | |||
2,072,470 | + | -0.8 | |||
2,072,471 | - | -0.1 | |||
2,072,781 | + | Pf6N2E2_1754 | 0.19 | -0.3 | |
2,072,782 | - | Pf6N2E2_1754 | 0.19 | -2.6 | |
2,072,815 | + | Pf6N2E2_1754 | 0.23 | -2.9 | |
2,073,237 | + | Pf6N2E2_1754 | 0.73 | -1.6 | |
2,073,622 | + | Pf6N2E2_1755 | 0.13 | -1.5 | |
2,073,623 | - | Pf6N2E2_1755 | 0.13 | -1.4 | |
2,073,623 | - | Pf6N2E2_1755 | 0.13 | -3.3 | |
2,073,721 | + | Pf6N2E2_1755 | 0.23 | -0.8 | |
2,073,721 | + | Pf6N2E2_1755 | 0.23 | -0.2 | |
2,073,722 | - | Pf6N2E2_1755 | 0.23 | -1.8 | |
2,073,722 | - | Pf6N2E2_1755 | 0.23 | +0.7 | |
2,073,775 | + | Pf6N2E2_1755 | 0.28 | +1.5 | |
2,073,776 | - | Pf6N2E2_1755 | 0.28 | +0.5 | |
2,073,776 | - | Pf6N2E2_1755 | 0.28 | -2.1 | |
2,073,923 | - | Pf6N2E2_1755 | 0.42 | -0.7 | |
2,073,944 | + | Pf6N2E2_1755 | 0.44 | -1.4 | |
2,074,060 | - | Pf6N2E2_1755 | 0.55 | +1.8 | |
2,074,060 | - | Pf6N2E2_1755 | 0.55 | -1.7 | |
2,074,195 | - | Pf6N2E2_1755 | 0.68 | +1.6 | |
2,074,372 | + | Pf6N2E2_1755 | 0.85 | -1.7 |
Or see this region's nucleotide sequence