Strain Fitness in Pantoea sp. MT58 around IAI47_15535

Experiment: Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
3,272,025	-				-1.4
3,272,025	-				+2.1
3,272,105	-				+1.1
3,272,138	-				-1.5
3,272,138	-				-1.1
3,272,138	-				+4.2
3,272,163	+				+0.2
3,272,163	+				-2.3
3,272,164	-				-0.5
3,272,164	-				-1.7
3,272,164	-				+1.4
3,272,164	-				-1.6
3,272,164	-				+2.5
3,272,183	+				+0.7
3,272,183	+				+0.8
3,272,184	-				-1.7
3,272,184	-				+1.0
3,272,184	-				-0.6
3,272,184	-				-0.9
3,272,186	+				-0.5
3,272,216	-				+0.4
3,272,350	+		IAI47_15535	0.16	-1.5
3,272,350	+		IAI47_15535	0.16	-3.3
3,272,351	-		IAI47_15535	0.16	+0.7
3,272,351	-		IAI47_15535	0.16	+3.2
3,272,351	-		IAI47_15535	0.16	+1.1
3,272,351	-		IAI47_15535	0.16	-0.0
3,272,351	-		IAI47_15535	0.16	-1.7
3,272,351	-		IAI47_15535	0.16	+2.2
3,272,405	+		IAI47_15535	0.23	-1.7
3,272,406	-		IAI47_15535	0.23	+0.5
3,272,497	+		IAI47_15535	0.35	-2.8
3,272,507	-		IAI47_15535	0.36	-0.8
3,272,534	+		IAI47_15535	0.39	-1.4
3,272,535	-		IAI47_15535	0.39	+2.1
3,272,545	+		IAI47_15535	0.41	+1.1
3,272,546	-		IAI47_15535	0.41	-1.7
3,272,546	-		IAI47_15535	0.41	+1.4
3,272,560	+		IAI47_15535	0.43	-0.9
3,272,560	+		IAI47_15535	0.43	+0.5
3,272,560	+		IAI47_15535	0.43	-2.3
3,272,561	-		IAI47_15535	0.43	+0.2
3,272,561	-		IAI47_15535	0.43	-0.1
3,272,569	+		IAI47_15535	0.44	-0.7
3,272,569	+		IAI47_15535	0.44	+2.1
3,272,569	+		IAI47_15535	0.44	+1.3
3,272,569	+		IAI47_15535	0.44	+0.7
3,272,570	-		IAI47_15535	0.44	+2.1
3,272,570	-		IAI47_15535	0.44	+2.6
3,272,570	-		IAI47_15535	0.44	+1.3
3,272,570	-		IAI47_15535	0.44	-1.3
3,272,578	+		IAI47_15535	0.45	-1.1
3,272,621	+		IAI47_15535	0.50	-2.5
3,272,621	+		IAI47_15535	0.50	+1.3
3,272,621	+		IAI47_15535	0.50	+1.4
3,272,621	+		IAI47_15535	0.50	+2.8
3,272,622	-		IAI47_15535	0.50	-1.0
3,272,622	-		IAI47_15535	0.50	+1.9
3,272,687	+		IAI47_15535	0.58	+0.5
3,272,687	+		IAI47_15535	0.58	+1.0
3,272,687	+		IAI47_15535	0.58	-1.5
3,272,687	+		IAI47_15535	0.58	+1.7
3,272,687	+		IAI47_15535	0.58	+0.5
3,272,687	+		IAI47_15535	0.58	-0.1
3,272,687	+		IAI47_15535	0.58	+4.2
3,272,687	+		IAI47_15535	0.58	+0.5
3,272,688	-		IAI47_15535	0.59	-1.9
3,272,688	-		IAI47_15535	0.59	-3.6
3,272,688	-		IAI47_15535	0.59	+2.8
3,272,688	-		IAI47_15535	0.59	-2.3
3,272,688	-		IAI47_15535	0.59	-0.2
3,272,688	-		IAI47_15535	0.59	+1.8
3,272,715	+		IAI47_15535	0.62	+1.8
3,272,716	-		IAI47_15535	0.62	+0.6
3,272,723	+		IAI47_15535	0.63	-2.4
3,272,724	-		IAI47_15535	0.63	-2.6
3,272,769	+		IAI47_15535	0.69	+1.4
3,272,769	+		IAI47_15535	0.69	+0.2
3,272,769	+		IAI47_15535	0.69	-0.2
3,272,770	-		IAI47_15535	0.69	+1.7
3,272,770	-		IAI47_15535	0.69	-0.0
3,272,777	+		IAI47_15535	0.70	+1.9
3,272,777	+		IAI47_15535	0.70	+4.1
3,272,778	-		IAI47_15535	0.70	-0.5
3,272,792	-		IAI47_15535	0.72	+4.1
3,272,806	-		IAI47_15535	0.73	-0.2
3,272,815	+		IAI47_15535	0.75	+0.3
3,272,824	+		IAI47_15535	0.76	+0.6
3,272,824	+		IAI47_15535	0.76	-0.5
3,272,824	+		IAI47_15535	0.76	+0.5
3,272,825	-		IAI47_15535	0.76	+1.9
3,272,825	-		IAI47_15535	0.76	-1.1
3,272,825	-		IAI47_15535	0.76	+2.4
3,272,825	-		IAI47_15535	0.76	+0.1
3,272,825	-		IAI47_15535	0.76	-1.8
3,272,825	-		IAI47_15535	0.76	+1.7
3,272,825	-		IAI47_15535	0.76	+1.1
3,272,829	+		IAI47_15535	0.76	-1.0
3,272,829	+		IAI47_15535	0.76	+1.6
3,272,829	+		IAI47_15535	0.76	+1.0
3,272,830	-		IAI47_15535	0.76	+1.4
3,272,855	+		IAI47_15535	0.80	+1.5
3,272,889	+		IAI47_15535	0.84	+0.9
3,272,890	-		IAI47_15535	0.84	+1.1
3,272,921	+		IAI47_15535	0.88	-0.9
3,272,921	+		IAI47_15535	0.88	+1.2
3,272,922	-		IAI47_15535	0.88	+3.4
3,272,922	-		IAI47_15535	0.88	-2.4
3,272,922	-		IAI47_15535	0.88	+0.7
3,272,922	-		IAI47_15535	0.88	+1.4
3,272,922	-		IAI47_15535	0.88	-1.7
3,272,929	+		IAI47_15535	0.89	-0.0
3,272,929	+		IAI47_15535	0.89	-2.6
3,272,929	+		IAI47_15535	0.89	-0.3
3,272,929	+		IAI47_15535	0.89	+1.3
3,272,929	+		IAI47_15535	0.89	+0.4
3,272,929	+		IAI47_15535	0.89	+1.2
3,272,929	+		IAI47_15535	0.89	-1.4
3,272,929	+		IAI47_15535	0.89	-3.0
3,272,929	+		IAI47_15535	0.89	-0.6
3,272,929	+		IAI47_15535	0.89	-0.4
3,272,929	+		IAI47_15535	0.89	+0.9
3,272,929	+		IAI47_15535	0.89	-0.7
3,272,929	+		IAI47_15535	0.89	+0.5
3,272,930	-		IAI47_15535	0.89	+0.5
3,272,930	-		IAI47_15535	0.89	+1.3
3,272,930	-		IAI47_15535	0.89	+1.8
3,272,930	-		IAI47_15535	0.89	-1.4
3,272,930	-		IAI47_15535	0.89	-0.9
3,272,930	-		IAI47_15535	0.89	+0.0
3,272,930	-		IAI47_15535	0.89	+0.3
3,272,930	-		IAI47_15535	0.89	-0.5
3,272,930	-		IAI47_15535	0.89	+0.1
3,272,930	-		IAI47_15535	0.89	-2.8
3,272,932	+		IAI47_15535	0.89	+3.5
3,272,932	+		IAI47_15535	0.89	+3.5
3,272,932	+		IAI47_15535	0.89	+0.7
3,272,932	+		IAI47_15535	0.89	+0.6
3,272,932	+		IAI47_15535	0.89	+0.6
3,272,932	+		IAI47_15535	0.89	+0.4
3,272,932	+		IAI47_15535	0.89	-0.8
3,272,932	+		IAI47_15535	0.89	-2.6
3,272,932	+		IAI47_15535	0.89	-1.1
3,272,932	+		IAI47_15535	0.89	+1.7
3,272,932	+		IAI47_15535	0.89	+0.6
3,272,932	+		IAI47_15535	0.89	+1.6
3,272,932	+		IAI47_15535	0.89	-3.0
3,272,932	+		IAI47_15535	0.89	-0.3
3,272,932	+		IAI47_15535	0.89	+0.7
3,272,932	+		IAI47_15535	0.89	-0.3
3,272,932	+		IAI47_15535	0.89	+0.1
3,272,932	+		IAI47_15535	0.89	-0.4
3,272,933	-		IAI47_15535	0.89	+0.7
3,272,933	-		IAI47_15535	0.89	-1.4
3,272,933	-		IAI47_15535	0.89	-1.8
3,272,933	-		IAI47_15535	0.89	-0.0
3,272,933	-		IAI47_15535	0.89	-0.1
3,272,933	-		IAI47_15535	0.89	+0.5
3,272,933	-		IAI47_15535	0.89	-2.6
3,272,964	+				-2.7
3,273,014	+				+0.3
3,273,014	+				-0.3
3,273,014	+				+0.6
3,273,015	-				-3.0
3,273,015	-				-0.6
3,273,015	-				-0.3
3,273,015	-				-1.2
3,273,015	-				+3.5
3,273,015	-				+0.3
3,273,348	-				+0.1
3,273,701	+		IAI47_15540	0.23	-0.3
3,273,703	+		IAI47_15540	0.23	+0.5
3,273,704	-		IAI47_15540	0.23	+2.1
3,273,754	+		IAI47_15540	0.25	-0.9
3,273,793	+		IAI47_15540	0.27	+0.5
3,273,966	-		IAI47_15540	0.33	-0.5
3,274,014	-		IAI47_15540	0.35	-0.3