Strain Fitness in Pantoea sp. MT58 around IAI47_14035

Experiment: Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
2,966,201	+				-2.1
2,966,201	+				-0.8
2,966,201	+				-0.0
2,966,201	+				-2.3
2,966,212	-				-0.7
2,966,212	-				+0.9
2,966,229	+				+1.5
2,966,230	-				+2.0
2,966,277	+				+0.9
2,966,277	+				+0.1
2,966,278	-				-0.8
2,966,278	-				+0.4
2,966,298	+				-0.3
2,966,299	-				-1.9
2,966,299	-				-1.5
2,966,299	-				+0.6
2,966,321	-				-1.6
2,966,321	-				+1.9
2,966,362	+		IAI47_14035	0.13	+0.8
2,966,362	+		IAI47_14035	0.13	+1.8
2,966,362	+		IAI47_14035	0.13	+0.7
2,966,362	+		IAI47_14035	0.13	+0.4
2,966,363	-		IAI47_14035	0.13	-1.0
2,966,363	-		IAI47_14035	0.13	-0.8
2,966,363	-		IAI47_14035	0.13	-0.6
2,966,363	-		IAI47_14035	0.13	-0.1
2,966,363	-		IAI47_14035	0.13	-0.1
2,966,395	+		IAI47_14035	0.16	+1.0
2,966,395	+		IAI47_14035	0.16	+4.0
2,966,395	+		IAI47_14035	0.16	+0.6
2,966,396	-		IAI47_14035	0.16	-2.7
2,966,396	-		IAI47_14035	0.16	-3.1
2,966,396	-		IAI47_14035	0.16	-1.3
2,966,443	+		IAI47_14035	0.20	-1.1
2,966,443	+		IAI47_14035	0.20	-2.1
2,966,443	+		IAI47_14035	0.20	+0.1
2,966,471	-		IAI47_14035	0.22	+0.4
2,966,471	-		IAI47_14035	0.22	-0.3
2,966,515	+		IAI47_14035	0.27	+0.3
2,966,515	+		IAI47_14035	0.27	+3.2
2,966,515	+		IAI47_14035	0.27	+3.0
2,966,516	-		IAI47_14035	0.27	-1.3
2,966,516	-		IAI47_14035	0.27	-2.8
2,966,516	-		IAI47_14035	0.27	+1.2
2,966,547	+		IAI47_14035	0.29	+0.7
2,966,547	+		IAI47_14035	0.29	-0.7
2,966,547	+		IAI47_14035	0.29	+0.3
2,966,566	+		IAI47_14035	0.31	-1.5
2,966,566	+		IAI47_14035	0.31	-0.0
2,966,566	+		IAI47_14035	0.31	+2.6
2,966,566	+		IAI47_14035	0.31	+0.7
2,966,567	-		IAI47_14035	0.31	-2.8
2,966,567	-		IAI47_14035	0.31	+4.5
2,966,567	-		IAI47_14035	0.31	+2.1
2,966,567	-		IAI47_14035	0.31	+0.8
2,966,567	-		IAI47_14035	0.31	-1.2
2,966,567	-		IAI47_14035	0.31	-2.5
2,966,567	-		IAI47_14035	0.31	+1.3
2,966,567	-		IAI47_14035	0.31	-0.0
2,966,567	-		IAI47_14035	0.31	-1.5
2,966,567	-		IAI47_14035	0.31	-0.0
2,966,632	+		IAI47_14035	0.37	+0.1
2,966,633	-		IAI47_14035	0.37	+0.8
2,966,633	-		IAI47_14035	0.37	+2.3
2,966,685	+		IAI47_14035	0.42	-0.3
2,966,685	+		IAI47_14035	0.42	+0.9
2,966,716	+		IAI47_14035	0.45	-2.0
2,966,716	+		IAI47_14035	0.45	+0.4
2,966,716	+		IAI47_14035	0.45	-2.1
2,966,717	-		IAI47_14035	0.45	-1.7
2,966,717	-		IAI47_14035	0.45	+3.0
2,966,717	-		IAI47_14035	0.45	+0.2
2,966,788	+		IAI47_14035	0.51	-0.3
2,966,788	+		IAI47_14035	0.51	-0.7
2,966,788	+		IAI47_14035	0.51	+0.7
2,966,788	+		IAI47_14035	0.51	-1.1
2,966,788	+		IAI47_14035	0.51	+0.4
2,966,788	+		IAI47_14035	0.51	+1.8
2,966,789	-		IAI47_14035	0.51	+3.7
2,966,789	-		IAI47_14035	0.51	+1.0
2,966,789	-		IAI47_14035	0.51	-1.2
2,966,789	-		IAI47_14035	0.51	-1.6
2,966,789	-		IAI47_14035	0.51	-1.6
2,966,789	-		IAI47_14035	0.51	-0.4
2,966,978	+		IAI47_14035	0.69	-1.0
2,966,978	+		IAI47_14035	0.69	-0.2
2,966,979	-		IAI47_14035	0.69	+2.5
2,966,988	+		IAI47_14035	0.70	+3.3
2,966,988	+		IAI47_14035	0.70	+1.5
2,966,988	+		IAI47_14035	0.70	+2.0
2,966,988	+		IAI47_14035	0.70	-0.5
2,966,988	+		IAI47_14035	0.70	+0.1
2,967,097	+		IAI47_14035	0.80	+0.9
2,967,097	+		IAI47_14035	0.80	-2.0
2,967,097	+		IAI47_14035	0.80	+2.2
2,967,098	-		IAI47_14035	0.80	-2.2
2,967,098	-		IAI47_14035	0.80	+2.0
2,967,098	-		IAI47_14035	0.80	-2.1
2,967,098	-		IAI47_14035	0.80	-0.2
2,967,098	-		IAI47_14035	0.80	+2.8
2,967,098	-		IAI47_14035	0.80	+1.3
2,967,098	-		IAI47_14035	0.80	+0.8
2,967,098	-		IAI47_14035	0.80	+1.5
2,967,098	-		IAI47_14035	0.80	+0.2
2,967,098	-		IAI47_14035	0.80	+1.6
2,967,098	-		IAI47_14035	0.80	+0.7
2,967,169	+		IAI47_14035	0.86	-2.3
2,967,211	+		IAI47_14035	0.90	+0.8
2,967,212	-				+0.4
2,967,212	-				-0.8
2,967,232	+				+2.3
2,967,300	+				+2.4
2,967,300	+				-2.3
2,967,301	-				+0.7
2,967,301	-				-1.5
2,967,301	-				+0.7
2,967,303	+				-0.7
2,967,304	-				-3.1
2,967,346	+				-0.1
2,967,346	+				-1.7
2,967,347	-				+2.2
2,967,347	-				-0.0
2,967,347	-				-0.6
2,967,355	+				-1.6
2,967,356	-				+2.7
2,967,401	+				-0.0
2,967,401	+				+3.5
2,967,442	+				-0.4
2,967,442	+				+0.5
2,967,443	-				+3.9
2,967,443	-				-2.5
2,967,448	+				+0.6
2,967,448	+				-2.1
2,967,449	-				+1.6
2,967,449	-				+3.2
2,967,478	+				-0.9
2,967,478	+				-0.9
2,967,478	+				+1.7
2,967,479	-				-0.3
2,967,512	+				-0.6
2,967,512	+				-1.7
2,967,512	+				+3.0
2,967,512	+				-1.9
2,967,512	+				-0.3
2,967,513	-				+0.9
2,967,513	-				-0.8
2,967,513	-				+1.0
2,967,513	-				-0.0
2,967,513	-				+0.3
2,967,513	-				-0.6
2,967,533	+				+0.7
2,967,533	+				-1.6
2,967,534	-				-1.2
2,967,534	-				-1.0
2,967,534	-				-2.5
2,967,534	-				+1.1
2,967,534	-				+0.9
2,967,597	+		IAI47_14040	0.12	+0.4
2,967,597	+		IAI47_14040	0.12	-1.0
2,967,597	+		IAI47_14040	0.12	+7.2
2,967,597	+		IAI47_14040	0.12	+0.8
2,967,598	-		IAI47_14040	0.12	-0.0
2,967,598	-		IAI47_14040	0.12	+2.8
2,967,598	-		IAI47_14040	0.12	-2.6
2,967,598	-		IAI47_14040	0.12	+2.0
2,967,598	-		IAI47_14040	0.12	-0.6
2,967,598	-		IAI47_14040	0.12	+0.6
2,967,598	-		IAI47_14040	0.12	-3.1
2,967,598	-		IAI47_14040	0.12	-0.4
2,967,598	-		IAI47_14040	0.12	-1.5
2,967,598	-		IAI47_14040	0.12	+1.3
2,967,598	-		IAI47_14040	0.12	+3.1
2,967,598	-		IAI47_14040	0.12	+2.3
2,967,612	+		IAI47_14040	0.13	-0.5
2,967,613	-		IAI47_14040	0.13	-0.3
2,967,693	+		IAI47_14040	0.20	-0.0
2,967,693	+		IAI47_14040	0.20	+2.3
2,967,693	+		IAI47_14040	0.20	+0.6
2,967,693	+		IAI47_14040	0.20	-1.5
2,967,693	+		IAI47_14040	0.20	+1.6
2,967,693	+		IAI47_14040	0.20	-2.2
2,967,693	+		IAI47_14040	0.20	+0.5
2,967,693	+		IAI47_14040	0.20	+3.3
2,967,693	+		IAI47_14040	0.20	+0.3
2,967,693	+		IAI47_14040	0.20	+0.2
2,967,693	+		IAI47_14040	0.20	-0.6
2,967,694	-		IAI47_14040	0.20	+2.3
2,967,694	-		IAI47_14040	0.20	-1.7
2,967,694	-		IAI47_14040	0.20	-1.0
2,967,694	-		IAI47_14040	0.20	+0.4
2,967,694	-		IAI47_14040	0.20	+2.3
2,967,694	-		IAI47_14040	0.20	+0.5
2,967,694	-		IAI47_14040	0.20	-0.1
2,967,694	-		IAI47_14040	0.20	+0.1
2,967,694	-		IAI47_14040	0.20	-0.8
2,967,694	-		IAI47_14040	0.20	-1.2
2,967,694	-		IAI47_14040	0.20	+1.0
2,967,694	-		IAI47_14040	0.20	+0.8
2,967,694	-		IAI47_14040	0.20	-2.2
2,967,694	-		IAI47_14040	0.20	-1.2
2,967,694	-		IAI47_14040	0.20	+1.0
2,967,694	-		IAI47_14040	0.20	-1.5
2,967,694	-		IAI47_14040	0.20	+1.0
2,967,789	-		IAI47_14040	0.28	-0.6
2,967,789	-		IAI47_14040	0.28	-1.0
2,967,789	-		IAI47_14040	0.28	+1.0
2,967,900	+		IAI47_14040	0.37	-0.0
2,967,900	+		IAI47_14040	0.37	-1.6
2,967,901	-		IAI47_14040	0.37	+1.1
2,967,901	-		IAI47_14040	0.37	+1.4
2,967,901	-		IAI47_14040	0.37	+1.0
2,967,945	+		IAI47_14040	0.41	+2.2
2,967,945	+		IAI47_14040	0.41	+1.1
2,967,945	+		IAI47_14040	0.41	+1.6
2,967,945	+		IAI47_14040	0.41	-1.7
2,967,946	-		IAI47_14040	0.41	+2.1
2,967,946	-		IAI47_14040	0.41	+1.0
2,967,946	-		IAI47_14040	0.41	-2.3
2,967,946	-		IAI47_14040	0.41	+2.2
2,967,946	-		IAI47_14040	0.41	+0.8
2,967,946	-		IAI47_14040	0.41	+1.9
2,967,972	-		IAI47_14040	0.43	-0.3
2,967,972	-		IAI47_14040	0.43	+0.9
2,968,014	+		IAI47_14040	0.46	+2.9
2,968,014	+		IAI47_14040	0.46	-1.7
2,968,014	+		IAI47_14040	0.46	+0.2
2,968,015	-		IAI47_14040	0.46	+2.6
2,968,015	-		IAI47_14040	0.46	-0.1
2,968,015	-		IAI47_14040	0.46	-0.7
2,968,015	-		IAI47_14040	0.46	+2.3
2,968,015	-		IAI47_14040	0.46	+0.8
2,968,077	+		IAI47_14040	0.51	-1.3
2,968,077	+		IAI47_14040	0.51	+5.9
2,968,077	+		IAI47_14040	0.51	-2.4
2,968,077	+		IAI47_14040	0.51	-1.2
2,968,077	+		IAI47_14040	0.51	+2.5
2,968,077	+		IAI47_14040	0.51	-0.7
2,968,077	+		IAI47_14040	0.51	-1.1
2,968,077	+		IAI47_14040	0.51	-1.0
2,968,077	+		IAI47_14040	0.51	+0.8
2,968,078	-		IAI47_14040	0.52	+0.8
2,968,078	-		IAI47_14040	0.52	+3.0
2,968,078	-		IAI47_14040	0.52	-0.8
2,968,078	-		IAI47_14040	0.52	-1.8
2,968,078	-		IAI47_14040	0.52	+0.6
2,968,078	-		IAI47_14040	0.52	-1.6
2,968,078	-		IAI47_14040	0.52	+0.3
2,968,086	+		IAI47_14040	0.52	-0.0
2,968,086	+		IAI47_14040	0.52	+0.2
2,968,088	+		IAI47_14040	0.52	-0.6
2,968,089	-		IAI47_14040	0.52	+0.5
2,968,089	-		IAI47_14040	0.52	+0.4
2,968,112	+		IAI47_14040	0.54	+0.7
2,968,112	+		IAI47_14040	0.54	-2.3
2,968,112	+		IAI47_14040	0.54	+0.6
2,968,113	-		IAI47_14040	0.54	-0.3
2,968,113	-		IAI47_14040	0.54	+2.1
2,968,113	-		IAI47_14040	0.54	+2.6
2,968,113	-		IAI47_14040	0.54	-0.0
2,968,113	-		IAI47_14040	0.54	-1.3
2,968,115	+		IAI47_14040	0.55	+3.0
2,968,116	-		IAI47_14040	0.55	+1.2
2,968,133	+		IAI47_14040	0.56	-0.9
2,968,134	-		IAI47_14040	0.56	-0.0
2,968,134	-		IAI47_14040	0.56	-1.5
2,968,152	-		IAI47_14040	0.58	-0.6
2,968,187	+		IAI47_14040	0.61	-1.2
2,968,187	+		IAI47_14040	0.61	-1.9
2,968,187	+		IAI47_14040	0.61	-3.2
2,968,187	+		IAI47_14040	0.61	+0.5
2,968,187	+		IAI47_14040	0.61	+0.7
2,968,187	+		IAI47_14040	0.61	-0.0
2,968,187	+		IAI47_14040	0.61	-2.6
2,968,188	-		IAI47_14040	0.61	+0.8
2,968,188	-		IAI47_14040	0.61	-2.0
2,968,188	-		IAI47_14040	0.61	-0.0
2,968,188	-		IAI47_14040	0.61	+0.3
2,968,188	-		IAI47_14040	0.61	+0.2
2,968,189	-		IAI47_14040	0.61	-1.8
2,968,190	+		IAI47_14040	0.61	-2.5
2,968,190	+		IAI47_14040	0.61	+2.1
2,968,190	+		IAI47_14040	0.61	-1.9
2,968,190	+		IAI47_14040	0.61	+2.1
2,968,190	+		IAI47_14040	0.61	+1.3
2,968,190	+		IAI47_14040	0.61	+1.7
2,968,191	-		IAI47_14040	0.61	-1.3
2,968,191	-		IAI47_14040	0.61	-0.8
2,968,191	-		IAI47_14040	0.61	-1.1
2,968,191	-		IAI47_14040	0.61	+0.3
2,968,191	-		IAI47_14040	0.61	-3.4
2,968,203	+		IAI47_14040	0.62	-3.4
2,968,268	+		IAI47_14040	0.67	+1.3
2,968,268	+		IAI47_14040	0.67	+0.7
2,968,268	+		IAI47_14040	0.67	-1.2
2,968,268	+		IAI47_14040	0.67	-1.5
2,968,268	+		IAI47_14040	0.67	-0.9
2,968,268	+		IAI47_14040	0.67	+1.0
2,968,268	+		IAI47_14040	0.67	-0.2
2,968,268	+		IAI47_14040	0.67	+2.3
2,968,268	+		IAI47_14040	0.67	-2.3
2,968,269	-		IAI47_14040	0.67	-1.3
2,968,269	-		IAI47_14040	0.67	+0.5
2,968,269	-		IAI47_14040	0.67	+2.0
2,968,269	-		IAI47_14040	0.67	+2.4
2,968,269	-		IAI47_14040	0.67	-1.3
2,968,269	-		IAI47_14040	0.67	+2.0
2,968,269	-		IAI47_14040	0.67	-0.2
2,968,269	-		IAI47_14040	0.67	-0.1
2,968,269	-		IAI47_14040	0.67	-0.3
2,968,269	-		IAI47_14040	0.67	-2.3
2,968,272	+		IAI47_14040	0.68	-2.6
2,968,272	+		IAI47_14040	0.68	+0.9
2,968,272	+		IAI47_14040	0.68	-0.8
2,968,272	+		IAI47_14040	0.68	+1.9
2,968,273	-		IAI47_14040	0.68	-0.8
2,968,273	-		IAI47_14040	0.68	-1.8
2,968,273	-		IAI47_14040	0.68	-0.3
2,968,273	-		IAI47_14040	0.68	-0.3
2,968,273	-		IAI47_14040	0.68	-0.1
2,968,273	-		IAI47_14040	0.68	+1.2
2,968,273	-		IAI47_14040	0.68	+0.7
2,968,273	-		IAI47_14040	0.68	-1.1
2,968,273	-		IAI47_14040	0.68	-0.2
2,968,273	-		IAI47_14040	0.68	-2.8
2,968,273	-		IAI47_14040	0.68	+0.5
2,968,273	-		IAI47_14040	0.68	+1.6
2,968,275	-		IAI47_14040	0.68	-0.3