Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26755 and BWI76_RS26760 are separated by 221 nucleotides BWI76_RS26760 and BWI76_RS26765 are separated by 154 nucleotides
BWI76_RS26755: BWI76_RS26755 - peptidase M16, at 5,540,764 to 5,542,269
_RS26755
BWI76_RS26760: BWI76_RS26760 - C4-dicarboxylate transport protein DctA (from data) , at 5,542,491 to 5,543,777
_RS26760
BWI76_RS26765: BWI76_RS26765 - phosphodiesterase, at 5,543,932 to 5,545,938
_RS26765
Position (kb)
5542
5543
5544 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5541.620 kb on - strand, within BWI76_RS26755 at 5541.951 kb on + strand, within BWI76_RS26755 at 5541.961 kb on - strand, within BWI76_RS26755 at 5541.987 kb on - strand, within BWI76_RS26755 at 5541.987 kb on - strand, within BWI76_RS26755 at 5541.987 kb on - strand, within BWI76_RS26755 at 5542.097 kb on - strand, within BWI76_RS26755 at 5542.134 kb on - strand at 5542.134 kb on - strand at 5542.211 kb on - strand at 5542.270 kb on - strand at 5542.359 kb on - strand at 5542.413 kb on - strand at 5542.531 kb on - strand at 5542.561 kb on - strand at 5542.568 kb on + strand at 5543.274 kb on + strand at 5543.321 kb on - strand, within BWI76_RS26760 at 5543.402 kb on - strand, within BWI76_RS26760 at 5543.446 kb on + strand, within BWI76_RS26760 at 5543.513 kb on + strand, within BWI76_RS26760 at 5543.516 kb on + strand, within BWI76_RS26760 at 5543.554 kb on - strand, within BWI76_RS26760 at 5543.616 kb on + strand, within BWI76_RS26760 at 5543.648 kb on + strand, within BWI76_RS26760 at 5543.672 kb on - strand at 5543.738 kb on - strand at 5543.753 kb on + strand at 5543.851 kb on - strand at 5544.009 kb on - strand at 5544.114 kb on + strand at 5544.122 kb on - strand at 5544.230 kb on - strand, within BWI76_RS26765 at 5544.235 kb on - strand, within BWI76_RS26765 at 5544.240 kb on - strand, within BWI76_RS26765 at 5544.614 kb on - strand, within BWI76_RS26765 at 5544.636 kb on - strand, within BWI76_RS26765 at 5544.735 kb on + strand, within BWI76_RS26765 at 5544.743 kb on - strand, within BWI76_RS26765
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 5,541,620 - BWI76_RS26755 0.57 +1.1 5,541,951 + BWI76_RS26755 0.79 +0.8 5,541,961 - BWI76_RS26755 0.79 -1.5 5,541,987 - BWI76_RS26755 0.81 -0.3 5,541,987 - BWI76_RS26755 0.81 +0.8 5,541,987 - BWI76_RS26755 0.81 +1.0 5,542,097 - BWI76_RS26755 0.89 -0.3 5,542,134 - +0.2 5,542,134 - +0.6 5,542,211 - +0.5 5,542,270 - -0.9 5,542,359 - +1.3 5,542,413 - -0.1 5,542,531 - +0.4 5,542,561 - -1.2 5,542,568 + -1.7 5,543,274 + -0.6 5,543,321 - BWI76_RS26760 0.64 -0.7 5,543,402 - BWI76_RS26760 0.71 -3.3 5,543,446 + BWI76_RS26760 0.74 +0.8 5,543,513 + BWI76_RS26760 0.79 -1.8 5,543,516 + BWI76_RS26760 0.80 -0.5 5,543,554 - BWI76_RS26760 0.83 -1.7 5,543,616 + BWI76_RS26760 0.87 -0.6 5,543,648 + BWI76_RS26760 0.90 -1.0 5,543,672 - -0.9 5,543,738 - -2.4 5,543,753 + +0.8 5,543,851 - -3.2 5,544,009 - +0.4 5,544,114 + +1.4 5,544,122 - -0.6 5,544,230 - BWI76_RS26765 0.15 -1.3 5,544,235 - BWI76_RS26765 0.15 +0.4 5,544,240 - BWI76_RS26765 0.15 +1.0 5,544,614 - BWI76_RS26765 0.34 -0.3 5,544,636 - BWI76_RS26765 0.35 +0.5 5,544,735 + BWI76_RS26765 0.40 +0.4 5,544,743 - BWI76_RS26765 0.40 +1.2
Or see this region's nucleotide sequence