Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26760

Experiment: L-Malic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26755 and BWI76_RS26760 are separated by 221 nucleotidesBWI76_RS26760 and BWI76_RS26765 are separated by 154 nucleotides BWI76_RS26755: BWI76_RS26755 - peptidase M16, at 5,540,764 to 5,542,269 _RS26755 BWI76_RS26760: BWI76_RS26760 - C4-dicarboxylate transport protein DctA (from data), at 5,542,491 to 5,543,777 _RS26760 BWI76_RS26765: BWI76_RS26765 - phosphodiesterase, at 5,543,932 to 5,545,938 _RS26765 Position (kb) 5542 5543 5544Strain fitness (log2 ratio) -3 -2 -1 0 1at 5541.620 kb on - strand, within BWI76_RS26755at 5541.951 kb on + strand, within BWI76_RS26755at 5541.961 kb on - strand, within BWI76_RS26755at 5541.987 kb on - strand, within BWI76_RS26755at 5541.987 kb on - strand, within BWI76_RS26755at 5541.987 kb on - strand, within BWI76_RS26755at 5542.097 kb on - strand, within BWI76_RS26755at 5542.134 kb on - strandat 5542.134 kb on - strandat 5542.211 kb on - strandat 5542.270 kb on - strandat 5542.359 kb on - strandat 5542.413 kb on - strandat 5542.531 kb on - strandat 5542.561 kb on - strandat 5542.568 kb on + strandat 5543.274 kb on + strandat 5543.321 kb on - strand, within BWI76_RS26760at 5543.402 kb on - strand, within BWI76_RS26760at 5543.446 kb on + strand, within BWI76_RS26760at 5543.513 kb on + strand, within BWI76_RS26760at 5543.516 kb on + strand, within BWI76_RS26760at 5543.554 kb on - strand, within BWI76_RS26760at 5543.616 kb on + strand, within BWI76_RS26760at 5543.648 kb on + strand, within BWI76_RS26760at 5543.672 kb on - strandat 5543.738 kb on - strandat 5543.753 kb on + strandat 5543.851 kb on - strandat 5544.009 kb on - strandat 5544.114 kb on + strandat 5544.122 kb on - strandat 5544.230 kb on - strand, within BWI76_RS26765at 5544.235 kb on - strand, within BWI76_RS26765at 5544.240 kb on - strand, within BWI76_RS26765at 5544.614 kb on - strand, within BWI76_RS26765at 5544.636 kb on - strand, within BWI76_RS26765at 5544.735 kb on + strand, within BWI76_RS26765at 5544.743 kb on - strand, within BWI76_RS26765

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Malic (C)
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5,541,620 - BWI76_RS26755 0.57 +1.1
5,541,951 + BWI76_RS26755 0.79 +0.8
5,541,961 - BWI76_RS26755 0.79 -1.5
5,541,987 - BWI76_RS26755 0.81 -0.3
5,541,987 - BWI76_RS26755 0.81 +0.8
5,541,987 - BWI76_RS26755 0.81 +1.0
5,542,097 - BWI76_RS26755 0.89 -0.3
5,542,134 - +0.2
5,542,134 - +0.6
5,542,211 - +0.5
5,542,270 - -0.9
5,542,359 - +1.3
5,542,413 - -0.1
5,542,531 - +0.4
5,542,561 - -1.2
5,542,568 + -1.7
5,543,274 + -0.6
5,543,321 - BWI76_RS26760 0.64 -0.7
5,543,402 - BWI76_RS26760 0.71 -3.3
5,543,446 + BWI76_RS26760 0.74 +0.8
5,543,513 + BWI76_RS26760 0.79 -1.8
5,543,516 + BWI76_RS26760 0.80 -0.5
5,543,554 - BWI76_RS26760 0.83 -1.7
5,543,616 + BWI76_RS26760 0.87 -0.6
5,543,648 + BWI76_RS26760 0.90 -1.0
5,543,672 - -0.9
5,543,738 - -2.4
5,543,753 + +0.8
5,543,851 - -3.2
5,544,009 - +0.4
5,544,114 + +1.4
5,544,122 - -0.6
5,544,230 - BWI76_RS26765 0.15 -1.3
5,544,235 - BWI76_RS26765 0.15 +0.4
5,544,240 - BWI76_RS26765 0.15 +1.0
5,544,614 - BWI76_RS26765 0.34 -0.3
5,544,636 - BWI76_RS26765 0.35 +0.5
5,544,735 + BWI76_RS26765 0.40 +0.4
5,544,743 - BWI76_RS26765 0.40 +1.2

Or see this region's nucleotide sequence