Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16280

Experiment: Cholin acetate 40 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 40 mM
3,678,683	+		AO356_16270	0.59	-1.5
3,678,683	+		AO356_16270	0.59	+0.3
3,678,683	+		AO356_16270	0.59	+0.2
3,678,684	-		AO356_16270	0.59	+0.5
3,678,684	-		AO356_16270	0.59	-0.9
3,678,684	-		AO356_16270	0.59	-0.4
3,678,686	+		AO356_16270	0.59	-0.2
3,678,686	+		AO356_16270	0.59	+0.5
3,678,686	+		AO356_16270	0.59	+1.1
3,678,686	+		AO356_16270	0.59	-1.0
3,678,687	-		AO356_16270	0.59	-0.9
3,678,714	+		AO356_16270	0.63	+0.2
3,678,715	-		AO356_16270	0.64	-0.2
3,678,771	+		AO356_16270	0.72	-0.0
3,678,772	-		AO356_16270	0.72	-1.0
3,678,787	+		AO356_16270	0.75	-0.0
3,678,788	-		AO356_16270	0.75	-0.8
3,678,788	-		AO356_16270	0.75	-1.0
3,678,848	+		AO356_16270	0.84	+0.8
3,678,848	+		AO356_16270	0.84	+0.2
3,678,848	+		AO356_16270	0.84	-0.6
3,678,848	+		AO356_16270	0.84	+2.1
3,678,848	+		AO356_16270	0.84	-0.1
3,678,848	+		AO356_16270	0.84	+0.1
3,678,848	+		AO356_16270	0.84	+0.4
3,678,920	+				+0.4
3,678,994	-				-2.5
3,679,030	+		AO356_16275	0.13	+0.0
3,679,057	+		AO356_16275	0.18	-1.1
3,679,057	+		AO356_16275	0.18	-0.5
3,679,057	+		AO356_16275	0.18	+0.2
3,679,057	+		AO356_16275	0.18	+0.7
3,679,057	+		AO356_16275	0.18	+0.7
3,679,057	+		AO356_16275	0.18	-0.5
3,679,057	+		AO356_16275	0.18	+0.6
3,679,057	+		AO356_16275	0.18	-1.5
3,679,058	-		AO356_16275	0.19	-1.5
3,679,058	-		AO356_16275	0.19	+0.5
3,679,058	-		AO356_16275	0.19	+0.7
3,679,058	-		AO356_16275	0.19	+0.4
3,679,058	-		AO356_16275	0.19	-0.2
3,679,058	-		AO356_16275	0.19	-0.9
3,679,087	+		AO356_16275	0.24	+0.3
3,679,111	+		AO356_16275	0.29	+0.8
3,679,111	+		AO356_16275	0.29	+1.3
3,679,112	-		AO356_16275	0.29	-0.3
3,679,185	+		AO356_16275	0.43	-0.5
3,679,185	+		AO356_16275	0.43	+0.4
3,679,185	+		AO356_16275	0.43	+0.1
3,679,185	+		AO356_16275	0.43	-0.0
3,679,186	-		AO356_16275	0.43	+0.4
3,679,186	-		AO356_16275	0.43	-0.4
3,679,186	-		AO356_16275	0.43	-0.5
3,679,186	-		AO356_16275	0.43	-1.6
3,679,186	-		AO356_16275	0.43	+0.8
3,679,234	+		AO356_16275	0.52	-0.3
3,679,234	+		AO356_16275	0.52	+0.4
3,679,234	+		AO356_16275	0.52	+1.1
3,679,234	+		AO356_16275	0.52	-0.2
3,679,234	+		AO356_16275	0.52	-0.5
3,679,234	+		AO356_16275	0.52	+0.7
3,679,234	+		AO356_16275	0.52	-0.6
3,679,234	+		AO356_16275	0.52	-0.0
3,679,234	+		AO356_16275	0.52	-0.3
3,679,234	+		AO356_16275	0.52	-0.1
3,679,234	+		AO356_16275	0.52	-0.2
3,679,234	+		AO356_16275	0.52	+0.5
3,679,234	+		AO356_16275	0.52	+1.5
3,679,234	+		AO356_16275	0.52	+0.1
3,679,235	-		AO356_16275	0.52	+1.9
3,679,235	-		AO356_16275	0.52	-1.8
3,679,235	-		AO356_16275	0.52	-0.2
3,679,235	-		AO356_16275	0.52	-0.5
3,679,235	-		AO356_16275	0.52	-0.1
3,679,235	-		AO356_16275	0.52	-0.7
3,679,235	-		AO356_16275	0.52	-1.0
3,679,235	-		AO356_16275	0.52	+2.8
3,679,235	-		AO356_16275	0.52	-3.7
3,679,235	-		AO356_16275	0.52	+0.1
3,679,235	-		AO356_16275	0.52	-0.0
3,679,235	-		AO356_16275	0.52	-0.1
3,679,235	-		AO356_16275	0.52	+0.6
3,679,235	-		AO356_16275	0.52	+0.9
3,679,435	+				+0.4
3,679,436	-				-0.2
3,679,506	+				-0.9
3,679,506	+				+0.5
3,679,507	-				+0.7
3,679,507	-				-0.7
3,679,507	-				-0.1
3,679,507	-				-1.1
3,679,566	-				-0.5
3,679,589	+				-0.4
3,679,589	+				-3.4
3,679,593	+				+1.2
3,679,593	+				-0.4
3,679,593	+				-0.1
3,679,593	+				+0.4
3,679,593	+				-1.0
3,679,593	+				+1.1
3,679,593	+				-0.6
3,679,593	+				-0.3
3,679,594	-				+0.4
3,679,594	-				-0.9
3,679,594	-				+1.1
3,679,594	-				-1.7
3,679,594	-				-0.5
3,679,594	-				+0.1
3,679,594	-				+1.2
3,679,645	+				-0.4
3,679,646	-				-0.6
3,679,669	+				-2.6
3,679,670	-				+0.3
3,679,670	-				+0.6
3,679,704	-				+0.3
3,679,704	-				+0.2
3,679,786	+		AO356_16280	0.10	-0.9
3,679,787	-		AO356_16280	0.10	-0.2
3,679,787	-		AO356_16280	0.10	-0.5
3,679,787	-		AO356_16280	0.10	-1.3
3,679,787	-		AO356_16280	0.10	+1.8
3,679,787	-		AO356_16280	0.10	+0.2
3,679,966	+		AO356_16280	0.25	-0.8
3,679,967	-		AO356_16280	0.26	+0.5
3,679,967	-		AO356_16280	0.26	+0.1
3,679,987	+		AO356_16280	0.27	-0.5
3,679,988	-		AO356_16280	0.27	-0.6
3,679,994	+		AO356_16280	0.28	-0.7
3,679,994	+		AO356_16280	0.28	+0.3
3,679,994	+		AO356_16280	0.28	-1.7
3,679,994	+		AO356_16280	0.28	+0.9
3,679,994	+		AO356_16280	0.28	-0.2
3,679,994	+		AO356_16280	0.28	-0.3
3,679,994	+		AO356_16280	0.28	-0.2
3,679,995	-		AO356_16280	0.28	-1.3
3,679,995	-		AO356_16280	0.28	-0.2
3,679,996	+		AO356_16280	0.28	-0.5
3,679,996	+		AO356_16280	0.28	-0.3
3,679,996	+		AO356_16280	0.28	-2.0
3,679,996	+		AO356_16280	0.28	+1.1
3,679,997	-		AO356_16280	0.28	+0.3
3,679,997	-		AO356_16280	0.28	+0.5
3,679,997	-		AO356_16280	0.28	-0.5
3,679,997	-		AO356_16280	0.28	+0.6
3,679,997	-		AO356_16280	0.28	+0.1
3,679,997	-		AO356_16280	0.28	-0.3
3,679,997	-		AO356_16280	0.28	+0.2
3,679,997	-		AO356_16280	0.28	-0.7
3,679,997	-		AO356_16280	0.28	-0.0
3,679,997	-		AO356_16280	0.28	-0.6
3,680,086	+		AO356_16280	0.36	-0.0
3,680,189	-		AO356_16280	0.45	+0.5
3,680,200	+		AO356_16280	0.45	+0.2
3,680,200	+		AO356_16280	0.45	-0.8
3,680,200	+		AO356_16280	0.45	-0.7
3,680,201	-		AO356_16280	0.46	-0.2
3,680,206	+		AO356_16280	0.46	+1.2
3,680,207	-		AO356_16280	0.46	-0.6
3,680,207	-		AO356_16280	0.46	+0.1
3,680,207	-		AO356_16280	0.46	-1.7
3,680,276	-		AO356_16280	0.52	-1.1
3,680,353	+		AO356_16280	0.59	-0.2
3,680,377	+		AO356_16280	0.61	+0.7
3,680,378	-		AO356_16280	0.61	-0.1
3,680,450	-		AO356_16280	0.67	+0.9
3,680,450	-		AO356_16280	0.67	-1.3
3,680,450	-		AO356_16280	0.67	-0.0
3,680,458	+		AO356_16280	0.68	-0.8
3,680,459	-		AO356_16280	0.68	-1.7
3,680,459	-		AO356_16280	0.68	+0.1
3,680,500	+		AO356_16280	0.71	+0.3
3,680,545	+		AO356_16280	0.75	+1.8
3,680,545	+		AO356_16280	0.75	-0.1
3,680,545	+		AO356_16280	0.75	+0.4
3,680,546	-		AO356_16280	0.75	-0.4
3,680,546	-		AO356_16280	0.75	-0.8
3,680,575	+		AO356_16280	0.78	-0.0
3,680,575	+		AO356_16280	0.78	+0.1
3,680,575	+		AO356_16280	0.78	+0.0
3,680,575	+		AO356_16280	0.78	-0.2
3,680,575	+		AO356_16280	0.78	-1.8
3,680,575	+		AO356_16280	0.78	+0.2
3,680,575	+		AO356_16280	0.78	-1.5
3,680,576	-		AO356_16280	0.78	-0.5
3,680,576	-		AO356_16280	0.78	-0.7
3,680,576	-		AO356_16280	0.78	-1.0
3,680,583	-		AO356_16280	0.78	-0.4
3,680,583	-		AO356_16280	0.78	-0.9
3,680,583	-		AO356_16280	0.78	+0.7
3,680,650	+		AO356_16280	0.84	+0.2
3,680,650	+		AO356_16280	0.84	+0.1
3,680,650	+		AO356_16280	0.84	+1.0
3,680,650	+		AO356_16280	0.84	-0.9
3,680,650	+		AO356_16280	0.84	-0.1
3,680,650	+		AO356_16280	0.84	+0.2
3,680,651	-		AO356_16280	0.84	-1.5
3,680,651	-		AO356_16280	0.84	-0.0
3,680,754	+				-0.6
3,680,755	-				+0.6
3,680,755	-				-1.1
3,680,755	-				-0.1
3,680,755	-				-0.3
3,680,755	-				-1.1
3,680,755	-				+0.8
3,680,820	+				+0.7
3,680,888	-				+0.4
3,680,931	-				-0.3
3,680,944	+				-1.3
3,680,973	+				-0.3
3,680,973	+				-0.4
3,680,974	-				+0.1
3,680,974	-				-1.5
3,681,022	+				+0.1
3,681,022	+				-2.3
3,681,022	+				+0.0
3,681,022	+				+0.0
3,681,022	+				+0.4
3,681,022	+				+0.6
3,681,022	+				-1.0
3,681,022	+				+1.1
3,681,022	+				-1.2
3,681,023	-				+0.1
3,681,023	-				+0.5
3,681,023	-				-0.3
3,681,023	-				+0.2
3,681,023	-				-2.4
3,681,023	-				-1.0
3,681,023	-				+0.8
3,681,023	-				+0.3
3,681,023	-				+0.2
3,681,023	-				-1.3
3,681,023	-				+0.1
3,681,023	-				-1.3
3,681,023	-				-1.1
3,681,023	-				-0.4
3,681,080	+				+0.4
3,681,081	-				-0.5
3,681,102	+		AO356_16285	0.11	-0.4
3,681,102	+		AO356_16285	0.11	+0.2
3,681,102	+		AO356_16285	0.11	+0.5
3,681,102	+		AO356_16285	0.11	-0.1
3,681,103	-		AO356_16285	0.11	+0.6
3,681,103	-		AO356_16285	0.11	+0.4
3,681,103	-		AO356_16285	0.11	-1.1
3,681,103	-		AO356_16285	0.11	-1.0
3,681,103	-		AO356_16285	0.11	-1.0
3,681,103	-		AO356_16285	0.11	-0.3
3,681,103	-		AO356_16285	0.11	+0.5
3,681,103	-		AO356_16285	0.11	+0.4
3,681,144	+		AO356_16285	0.14	+0.4
3,681,144	+		AO356_16285	0.14	+1.6
3,681,144	+		AO356_16285	0.14	-0.1
3,681,145	-		AO356_16285	0.14	-1.0
3,681,145	-		AO356_16285	0.14	+0.5
3,681,145	-		AO356_16285	0.14	+0.2
3,681,145	-		AO356_16285	0.14	-0.2
3,681,171	+		AO356_16285	0.16	-0.4
3,681,171	+		AO356_16285	0.16	-0.3
3,681,171	+		AO356_16285	0.16	+0.5
3,681,171	+		AO356_16285	0.16	+0.7
3,681,172	-		AO356_16285	0.16	+0.5
3,681,172	-		AO356_16285	0.16	+0.6
3,681,172	-		AO356_16285	0.16	+0.5
3,681,202	-		AO356_16285	0.18	+0.1
3,681,265	-		AO356_16285	0.22	-0.6
3,681,285	+		AO356_16285	0.24	+0.8
3,681,285	+		AO356_16285	0.24	+1.3
3,681,285	+		AO356_16285	0.24	-0.6
3,681,285	+		AO356_16285	0.24	+1.2
3,681,286	-		AO356_16285	0.24	+0.8
3,681,286	-		AO356_16285	0.24	-0.5
3,681,286	-		AO356_16285	0.24	+0.3
3,681,286	-		AO356_16285	0.24	-0.6
3,681,325	+		AO356_16285	0.26	+2.6
3,681,325	+		AO356_16285	0.26	+0.6
3,681,325	+		AO356_16285	0.26	+0.8
3,681,325	+		AO356_16285	0.26	+0.4
3,681,325	+		AO356_16285	0.26	-0.4
3,681,326	-		AO356_16285	0.26	+0.3
3,681,326	-		AO356_16285	0.26	-0.4
3,681,326	-		AO356_16285	0.26	-0.2
3,681,391	-		AO356_16285	0.31	+0.4
3,681,505	+		AO356_16285	0.39	-0.1
3,681,505	+		AO356_16285	0.39	-0.2
3,681,505	+		AO356_16285	0.39	+0.3
3,681,505	+		AO356_16285	0.39	+0.5
3,681,505	+		AO356_16285	0.39	-0.8
3,681,505	+		AO356_16285	0.39	-0.2
3,681,505	+		AO356_16285	0.39	-1.0
3,681,505	+		AO356_16285	0.39	+0.5
3,681,505	+		AO356_16285	0.39	-0.7
3,681,505	+		AO356_16285	0.39	+0.5
3,681,505	+		AO356_16285	0.39	+2.2
3,681,505	+		AO356_16285	0.39	+0.3
3,681,506	-		AO356_16285	0.39	-0.5
3,681,506	-		AO356_16285	0.39	+0.3
3,681,506	-		AO356_16285	0.39	-0.5
3,681,506	-		AO356_16285	0.39	+1.4
3,681,506	-		AO356_16285	0.39	+0.5
3,681,507	+		AO356_16285	0.39	+1.0
3,681,507	+		AO356_16285	0.39	-1.0
3,681,507	+		AO356_16285	0.39	+0.8
3,681,507	+		AO356_16285	0.39	+0.2
3,681,508	-		AO356_16285	0.39	+0.5
3,681,508	-		AO356_16285	0.39	-2.1
3,681,508	-		AO356_16285	0.39	-0.1
3,681,508	-		AO356_16285	0.39	+0.2
3,681,584	+		AO356_16285	0.45	+1.4
3,681,585	-		AO356_16285	0.45	-0.3
3,681,727	-		AO356_16285	0.55	-0.5