Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12890

Experiment: Cholin acetate 40 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 40 mM
2,933,271	+				-0.2
2,933,271	+				+0.2
2,933,271	+				+0.3
2,933,271	+				-0.9
2,933,271	+				+0.8
2,933,272	-				+1.0
2,933,298	+				-0.6
2,933,298	+				-0.7
2,933,298	+				-0.7
2,933,298	+				+0.3
2,933,299	-				+0.2
2,933,299	-				+0.3
2,933,299	-				+1.2
2,933,299	-				-0.2
2,933,299	-				-0.2
2,933,299	-				-0.7
2,933,334	+				+0.8
2,933,334	+				-1.6
2,933,334	+				-0.7
2,933,334	+				-1.5
2,933,335	-				-1.1
2,933,469	-		AO356_12885	0.24	-0.7
2,933,469	-		AO356_12885	0.24	-0.7
2,933,469	-		AO356_12885	0.24	-0.6
2,933,469	-		AO356_12885	0.24	-1.3
2,933,577	-		AO356_12885	0.42	-0.7
2,933,765	+		AO356_12885	0.72	-1.2
2,933,765	+		AO356_12885	0.72	-0.1
2,933,765	+		AO356_12885	0.72	-2.2
2,933,765	+		AO356_12885	0.72	+0.2
2,933,766	-		AO356_12885	0.72	-3.2
2,933,786	+		AO356_12885	0.75	-1.1
2,933,829	+		AO356_12885	0.82	-0.2
2,933,829	+		AO356_12885	0.82	-1.1
2,933,829	+		AO356_12885	0.82	-1.0
2,933,829	+		AO356_12885	0.82	-2.0
2,933,829	+		AO356_12885	0.82	-0.4
2,933,829	+		AO356_12885	0.82	-1.1
2,933,829	+		AO356_12885	0.82	-1.3
2,933,829	+		AO356_12885	0.82	-0.9
2,933,830	-		AO356_12885	0.82	-0.9
2,933,830	-		AO356_12885	0.82	-0.4
2,933,830	-		AO356_12885	0.82	-0.6
2,933,830	-		AO356_12885	0.82	-1.1
2,933,831	+		AO356_12885	0.82	-0.5
2,933,831	+		AO356_12885	0.82	-2.7
2,933,831	+		AO356_12885	0.82	-1.7
2,933,831	+		AO356_12885	0.82	-0.8
2,933,831	+		AO356_12885	0.82	-1.6
2,933,831	+		AO356_12885	0.82	+0.9
2,933,831	+		AO356_12885	0.82	-1.9
2,933,832	-		AO356_12885	0.83	-1.6
2,933,832	-		AO356_12885	0.83	-3.4
2,933,832	-		AO356_12885	0.83	-3.8
2,933,832	-		AO356_12885	0.83	-3.4
2,933,909	+				+0.0
2,933,910	-				-2.1
2,933,973	+				-1.1
2,933,974	-				-0.2
2,933,974	-				+0.8
2,933,974	-				-0.6
2,933,999	+				-0.7
2,934,000	-				-0.6
2,934,000	-				-1.6
2,934,030	+				-1.7
2,934,030	+				-0.1
2,934,030	+				-0.8
2,934,091	+				-0.3
2,934,091	+				+0.5
2,934,092	-				-0.4
2,934,092	-				-0.3
2,934,092	-				+0.5
2,934,092	-				+0.4
2,934,092	-				-1.1
2,934,092	-				-1.2
2,934,102	+				+1.3
2,934,102	+				+0.3
2,934,102	+				-0.2
2,934,103	-				-0.1
2,934,103	-				-1.1
2,934,103	-				-0.8
2,934,103	-				-0.9
2,934,104	+				-0.6
2,934,104	+				-0.0
2,934,104	+				+0.4
2,934,104	+				+0.7
2,934,105	-				-1.2
2,934,105	-				-1.5
2,934,105	-				+0.4
2,934,105	-				-0.3
2,934,105	-				-3.2
2,934,105	-				+1.9
2,934,105	-				+0.4
2,934,105	-				-1.2
2,934,105	-				+0.3
2,934,105	-				-0.7
2,934,105	-				+0.2
2,934,153	+				-0.9
2,934,270	-		AO356_12890	0.12	-0.6
2,934,584	-		AO356_12890	0.43	-2.6
2,934,584	-		AO356_12890	0.43	-0.7
2,934,748	+		AO356_12890	0.59	+0.7
2,934,760	+		AO356_12890	0.61	+1.1
2,934,760	+		AO356_12890	0.61	+0.4
2,934,761	-		AO356_12890	0.61	+0.9
2,934,761	-		AO356_12890	0.61	+0.6
2,934,761	-		AO356_12890	0.61	-0.1
2,934,772	+		AO356_12890	0.62	+1.1
2,934,773	-		AO356_12890	0.62	-0.6
2,934,773	-		AO356_12890	0.62	-1.7
2,934,773	-		AO356_12890	0.62	+0.3
2,934,773	-		AO356_12890	0.62	-0.8
2,934,773	-		AO356_12890	0.62	+0.4
2,934,775	+		AO356_12890	0.62	-0.4
2,934,776	-		AO356_12890	0.62	+0.8
2,934,776	-		AO356_12890	0.62	-2.0
2,934,838	+		AO356_12890	0.68	-1.0
2,934,839	-		AO356_12890	0.68	-0.7
2,934,839	-		AO356_12890	0.68	+0.4
2,934,937	+		AO356_12890	0.78	+0.7
2,934,938	-		AO356_12890	0.78	+0.2
2,934,938	-		AO356_12890	0.78	-0.8
2,934,992	-		AO356_12890	0.84	-0.2
2,934,992	-		AO356_12890	0.84	+0.2
2,935,009	+		AO356_12890	0.85	-0.6
2,935,010	-		AO356_12890	0.85	+0.8
2,935,114	+				-0.9
2,935,114	+				+0.4
2,935,114	+				+0.7
2,935,114	+				-0.6
2,935,114	+				-0.0
2,935,114	+				+0.7
2,935,114	+				-0.6
2,935,115	-				-1.3
2,935,115	-				-0.2
2,935,115	-				-1.7
2,935,115	-				+0.2
2,935,115	-				-1.1
2,935,115	-				-1.2
2,935,115	-				-1.1
2,935,142	+				+0.2
2,935,142	+				-1.6
2,935,156	+				+0.6
2,935,157	-				-0.5
2,935,157	-				-1.9
2,935,157	-				-1.7
2,935,182	-				-2.2
2,935,182	-				-1.2
2,935,338	+				-0.7
2,935,338	+				+0.2
2,935,338	+				-1.8
2,935,338	+				-0.6
2,935,338	+				-1.5
2,935,338	+				-1.8
2,935,338	+				-0.9
2,935,338	+				-0.9
2,935,338	+				-1.5
2,935,338	+				-1.5
2,935,339	-				-1.9
2,935,339	-				-1.3
2,935,339	-				-1.7
2,935,339	-				-0.9
2,935,339	-				-2.2
2,935,339	-				-2.2
2,935,339	-				-1.7
2,935,339	-				-1.1
2,935,408	-		AO356_12895	0.10	-2.1
2,935,669	-		AO356_12895	0.22	-0.3
2,935,705	-		AO356_12895	0.24	-1.5
2,935,920	+		AO356_12895	0.34	-1.2
2,935,920	+		AO356_12895	0.34	-1.4
2,935,920	+		AO356_12895	0.34	-1.3
2,935,920	+		AO356_12895	0.34	-2.8
2,935,920	+		AO356_12895	0.34	-1.9
2,935,920	+		AO356_12895	0.34	-1.0
2,935,920	+		AO356_12895	0.34	-2.6
2,935,920	+		AO356_12895	0.34	-1.2
2,935,920	+		AO356_12895	0.34	-1.0
2,935,920	+		AO356_12895	0.34	-1.7
2,935,920	+		AO356_12895	0.34	-2.1
2,935,920	+		AO356_12895	0.34	-3.2
2,935,920	+		AO356_12895	0.34	-1.0
2,935,920	+		AO356_12895	0.34	-1.2
2,935,920	+		AO356_12895	0.34	-0.5
2,935,920	+		AO356_12895	0.34	-1.4
2,935,920	+		AO356_12895	0.34	-0.8
2,935,920	+		AO356_12895	0.34	-2.5
2,935,920	+		AO356_12895	0.34	-1.1
2,935,920	+		AO356_12895	0.34	-1.2
2,935,920	+		AO356_12895	0.34	-1.1
2,935,920	+		AO356_12895	0.34	-1.0
2,935,920	+		AO356_12895	0.34	-0.8
2,935,920	+		AO356_12895	0.34	-1.5
2,935,920	+		AO356_12895	0.34	-1.4
2,935,920	+		AO356_12895	0.34	-0.8
2,935,921	-		AO356_12895	0.34	-0.9
2,935,921	-		AO356_12895	0.34	-1.5
2,935,921	-		AO356_12895	0.34	-1.5
2,935,921	-		AO356_12895	0.34	-1.4
2,935,921	-		AO356_12895	0.34	-2.7
2,935,921	-		AO356_12895	0.34	+0.2
2,935,921	-		AO356_12895	0.34	-1.2
2,935,921	-		AO356_12895	0.34	-1.4
2,935,921	-		AO356_12895	0.34	-0.2
2,935,921	-		AO356_12895	0.34	-0.7
2,935,921	-		AO356_12895	0.34	-1.0
2,935,921	-		AO356_12895	0.34	-0.2
2,935,921	-		AO356_12895	0.34	-2.1
2,935,993	-		AO356_12895	0.37	-2.5
2,935,993	-		AO356_12895	0.37	-1.6
2,935,993	-		AO356_12895	0.37	-1.6
2,936,148	+		AO356_12895	0.44	-1.7
2,936,148	+		AO356_12895	0.44	-0.7