Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12330

Experiment: Cholin acetate 40 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 40 mM
2,813,782	+		AO356_12320	0.66	+0.0
2,813,782	+		AO356_12320	0.66	-0.4
2,813,782	+		AO356_12320	0.66	+0.8
2,813,782	+		AO356_12320	0.66	+1.1
2,813,782	+		AO356_12320	0.66	+0.7
2,813,783	-		AO356_12320	0.66	-1.4
2,813,783	-		AO356_12320	0.66	-2.2
2,813,783	-		AO356_12320	0.66	+1.5
2,813,783	-		AO356_12320	0.66	-1.5
2,814,004	+				-0.4
2,814,004	+				-0.1
2,814,004	+				+1.1
2,814,004	+				-0.1
2,814,004	+				-1.2
2,814,004	+				-1.1
2,814,004	+				+1.0
2,814,004	+				-1.3
2,814,004	+				-0.0
2,814,004	+				-1.8
2,814,005	-				-0.5
2,814,005	-				-1.9
2,814,157	+		AO356_12325	0.20	-2.0
2,814,157	+		AO356_12325	0.20	-2.3
2,814,157	+		AO356_12325	0.20	-0.4
2,814,157	+		AO356_12325	0.20	-0.4
2,814,158	-		AO356_12325	0.21	-0.0
2,814,158	-		AO356_12325	0.21	-1.3
2,814,158	-		AO356_12325	0.21	+0.8
2,814,220	+		AO356_12325	0.29	-1.5
2,814,220	+		AO356_12325	0.29	+0.0
2,814,220	+		AO356_12325	0.29	-0.6
2,814,220	+		AO356_12325	0.29	+0.0
2,814,221	-		AO356_12325	0.29	-0.4
2,814,221	-		AO356_12325	0.29	-0.4
2,814,221	-		AO356_12325	0.29	-0.1
2,814,221	-		AO356_12325	0.29	-1.8
2,814,221	-		AO356_12325	0.29	-0.1
2,814,376	+		AO356_12325	0.50	+0.1
2,814,424	+		AO356_12325	0.57	-0.5
2,814,424	+		AO356_12325	0.57	-1.2
2,814,424	+		AO356_12325	0.57	-1.3
2,814,425	-		AO356_12325	0.57	-0.4
2,814,425	-		AO356_12325	0.57	-0.7
2,814,425	-		AO356_12325	0.57	-1.1
2,814,425	-		AO356_12325	0.57	+0.2
2,814,425	-		AO356_12325	0.57	+0.6
2,814,571	+		AO356_12325	0.77	-0.8
2,814,571	+		AO356_12325	0.77	+0.1
2,814,571	+		AO356_12325	0.77	-0.7
2,814,571	+		AO356_12325	0.77	-0.3
2,814,571	+		AO356_12325	0.77	-0.6
2,814,572	-		AO356_12325	0.77	+3.1
2,814,572	-		AO356_12325	0.77	-0.6
2,814,572	-		AO356_12325	0.77	-0.5
2,814,572	-		AO356_12325	0.77	-0.6
2,814,572	-		AO356_12325	0.77	-0.3
2,814,572	-		AO356_12325	0.77	-1.8
2,814,572	-		AO356_12325	0.77	-0.0
2,814,572	-		AO356_12325	0.77	+0.8
2,814,572	-		AO356_12325	0.77	-1.0
2,814,629	+		AO356_12325	0.85	-0.3
2,814,630	-		AO356_12325	0.85	-1.6
2,814,630	-		AO356_12325	0.85	-0.0
2,814,630	-		AO356_12325	0.85	-1.0
2,814,630	-		AO356_12325	0.85	+0.4
2,814,813	+				-0.1
2,814,814	-				-1.5
2,814,987	+				-0.9
2,814,987	+				+0.6
2,814,987	+				-1.1
2,814,987	+				-0.8
2,814,987	+				-1.1
2,814,987	+				-1.0
2,814,987	+				-1.7
2,814,987	+				+0.3
2,814,987	+				+1.0
2,814,987	+				+0.2
2,814,987	+				+0.3
2,814,987	+				-0.3
2,814,988	-				+0.8
2,814,988	-				-0.4
2,814,988	-				+0.5
2,814,988	-				+0.0
2,814,990	+				-0.8
2,814,990	+				+0.3
2,814,990	+				+0.4
2,814,990	+				-0.1
2,814,990	+				+0.1
2,814,990	+				+0.0
2,814,990	+				+0.8
2,814,990	+				-1.2
2,814,990	+				+0.5
2,814,990	+				+0.1
2,814,990	+				+0.5
2,814,990	+				+0.1
2,814,990	+				+0.1
2,814,990	+				+0.8
2,814,991	-				+1.9
2,814,991	-				+1.0
2,814,991	-				-0.9
2,814,991	-				-0.8
2,814,991	-				-0.5
2,814,991	-				+1.3
2,814,991	-				-0.8
2,814,991	-				+0.2
2,814,991	-				+0.4
2,814,991	-				+0.1
2,814,991	-				-0.2
2,814,991	-				-1.1
2,814,991	-				+0.3
2,815,005	+				-0.3
2,815,005	+				+0.7
2,815,005	+				-0.6
2,815,006	-				-0.1
2,815,071	+		AO356_12330	0.11	-0.2
2,815,071	+		AO356_12330	0.11	+0.5
2,815,071	+		AO356_12330	0.11	-1.9
2,815,071	+		AO356_12330	0.11	+0.6
2,815,071	+		AO356_12330	0.11	-0.7
2,815,071	+		AO356_12330	0.11	+0.4
2,815,072	-		AO356_12330	0.11	-1.1
2,815,072	-		AO356_12330	0.11	-0.2
2,815,072	-		AO356_12330	0.11	+1.2
2,815,072	-		AO356_12330	0.11	+1.8
2,815,072	-		AO356_12330	0.11	+0.4
2,815,101	+		AO356_12330	0.12	-0.4
2,815,101	+		AO356_12330	0.12	+0.3
2,815,101	+		AO356_12330	0.12	-0.3
2,815,102	-		AO356_12330	0.12	+0.5
2,815,251	-		AO356_12330	0.17	-1.2
2,815,260	+		AO356_12330	0.17	+0.4
2,815,260	+		AO356_12330	0.17	-0.5
2,815,260	+		AO356_12330	0.17	-0.2
2,815,260	+		AO356_12330	0.17	-1.6
2,815,260	+		AO356_12330	0.17	-0.3
2,815,260	+		AO356_12330	0.17	-0.4
2,815,260	+		AO356_12330	0.17	-0.7
2,815,260	+		AO356_12330	0.17	+0.5
2,815,261	-		AO356_12330	0.17	+1.6
2,815,261	-		AO356_12330	0.17	-0.2
2,815,261	-		AO356_12330	0.17	+1.8
2,815,261	-		AO356_12330	0.17	+1.7
2,815,261	-		AO356_12330	0.17	-0.9
2,815,261	-		AO356_12330	0.17	-0.2
2,815,261	-		AO356_12330	0.17	+0.3
2,815,261	-		AO356_12330	0.17	-0.2
2,815,261	-		AO356_12330	0.17	+1.6
2,815,261	-		AO356_12330	0.17	-1.0
2,815,261	-		AO356_12330	0.17	+0.7
2,815,314	+		AO356_12330	0.19	-0.9
2,815,314	+		AO356_12330	0.19	-0.7
2,815,315	-		AO356_12330	0.19	+0.1
2,815,362	+		AO356_12330	0.20	+0.5
2,815,362	+		AO356_12330	0.20	+0.7
2,815,363	-		AO356_12330	0.20	+0.3
2,815,363	-		AO356_12330	0.20	+1.1
2,815,363	-		AO356_12330	0.20	-0.0
2,815,363	-		AO356_12330	0.20	-1.3
2,815,363	-		AO356_12330	0.20	-2.1
2,815,365	-		AO356_12330	0.20	-0.2
2,815,526	+		AO356_12330	0.25	-0.1
2,815,659	+		AO356_12330	0.30	+1.1
2,815,660	-		AO356_12330	0.30	-0.3
2,815,660	-		AO356_12330	0.30	-0.8
2,815,660	-		AO356_12330	0.30	+0.4
2,815,660	-		AO356_12330	0.30	+2.2
2,815,660	-		AO356_12330	0.30	+0.0
2,816,000	-		AO356_12330	0.41	+1.2
2,816,000	-		AO356_12330	0.41	+1.8
2,816,003	-		AO356_12330	0.41	+0.1
2,816,115	+		AO356_12330	0.44	-0.8
2,816,115	+		AO356_12330	0.44	+0.4
2,816,115	+		AO356_12330	0.44	-1.4
2,816,115	+		AO356_12330	0.44	+0.5
2,816,115	+		AO356_12330	0.44	+0.8
2,816,115	+		AO356_12330	0.44	+0.2
2,816,115	+		AO356_12330	0.44	-0.8
2,816,115	+		AO356_12330	0.44	+1.5
2,816,115	+		AO356_12330	0.44	+1.0
2,816,115	+		AO356_12330	0.44	-0.5
2,816,115	+		AO356_12330	0.44	+0.3
2,816,115	+		AO356_12330	0.44	+0.1
2,816,115	+		AO356_12330	0.44	+0.2
2,816,115	+		AO356_12330	0.44	+0.4
2,816,115	+		AO356_12330	0.44	+0.1
2,816,115	+		AO356_12330	0.44	-0.6
2,816,115	+		AO356_12330	0.44	+1.3
2,816,115	+		AO356_12330	0.44	+0.3
2,816,116	-		AO356_12330	0.44	-0.0
2,816,116	-		AO356_12330	0.44	-0.3
2,816,116	-		AO356_12330	0.44	-0.1
2,816,116	-		AO356_12330	0.44	-0.6
2,816,116	-		AO356_12330	0.44	+0.2
2,816,116	-		AO356_12330	0.44	+0.1
2,816,116	-		AO356_12330	0.44	-0.2
2,816,116	-		AO356_12330	0.44	+0.1
2,816,116	-		AO356_12330	0.44	-1.4
2,816,116	-		AO356_12330	0.44	+0.4
2,816,116	-		AO356_12330	0.44	+0.6
2,816,116	-		AO356_12330	0.44	-0.0
2,816,116	-		AO356_12330	0.44	-1.3
2,816,116	-		AO356_12330	0.44	-0.8
2,816,116	-		AO356_12330	0.44	+0.2
2,816,116	-		AO356_12330	0.44	-1.4
2,816,116	-		AO356_12330	0.44	+0.0
2,816,116	-		AO356_12330	0.44	+0.5
2,816,121	+		AO356_12330	0.45	+1.0
2,816,121	+		AO356_12330	0.45	+1.2
2,816,122	-		AO356_12330	0.45	+0.4
2,816,122	-		AO356_12330	0.45	+1.1
2,816,122	-		AO356_12330	0.45	-0.1
2,816,427	+		AO356_12330	0.54	-0.4
2,816,427	+		AO356_12330	0.54	-0.3
2,816,427	+		AO356_12330	0.54	+1.2
2,816,427	+		AO356_12330	0.54	-0.9
2,816,427	+		AO356_12330	0.54	+0.5
2,816,427	+		AO356_12330	0.54	-1.1
2,816,427	+		AO356_12330	0.54	+0.2
2,816,427	+		AO356_12330	0.54	-0.1
2,816,427	+		AO356_12330	0.54	+0.7
2,816,427	+		AO356_12330	0.54	+1.1
2,816,622	+		AO356_12330	0.61	-0.3
2,816,622	+		AO356_12330	0.61	-0.6
2,816,622	+		AO356_12330	0.61	+0.2
2,816,623	-		AO356_12330	0.61	+0.3
2,816,623	-		AO356_12330	0.61	-0.9
2,816,751	+		AO356_12330	0.65	-1.1
2,816,751	+		AO356_12330	0.65	+0.7
2,816,752	-		AO356_12330	0.65	-0.4
2,816,752	-		AO356_12330	0.65	+0.3
2,816,752	-		AO356_12330	0.65	+0.0
2,816,752	-		AO356_12330	0.65	+0.1
2,816,914	-		AO356_12330	0.70	+0.4
2,817,039	+		AO356_12330	0.74	-0.2
2,817,039	+		AO356_12330	0.74	-0.8
2,817,039	+		AO356_12330	0.74	+0.7
2,817,039	+		AO356_12330	0.74	+0.1
2,817,039	+		AO356_12330	0.74	+0.2
2,817,039	+		AO356_12330	0.74	-0.6
2,817,040	-		AO356_12330	0.74	-0.2
2,817,040	-		AO356_12330	0.74	+0.0
2,817,040	-		AO356_12330	0.74	+1.5
2,817,144	+		AO356_12330	0.78	-0.4
2,817,144	+		AO356_12330	0.78	-1.5
2,817,144	+		AO356_12330	0.78	-0.0
2,817,144	+		AO356_12330	0.78	+0.4
2,817,145	-		AO356_12330	0.78	+0.6
2,817,145	-		AO356_12330	0.78	+0.2
2,817,145	-		AO356_12330	0.78	+0.6
2,817,552	+				-0.1
2,817,552	+				+0.0
2,817,552	+				-1.2
2,817,552	+				-2.6
2,817,552	+				+0.2
2,817,552	+				+1.1
2,817,553	-				+1.0
2,817,553	-				+0.4
2,817,553	-				-1.1
2,817,553	-				+1.5
2,817,553	-				-2.1
2,817,553	-				+0.0
2,817,553	-				+0.8
2,817,553	-				+0.6
2,817,553	-				-0.5
2,817,553	-				+0.0
2,817,553	-				-0.5
2,817,621	+				+0.9
2,817,622	-				+0.1
2,817,622	-				+0.1
2,817,811	-				+0.9
2,817,811	-				-1.4
2,817,811	-				-1.0
2,817,890	+				-1.2
2,817,890	+				+0.6
2,817,891	-				+0.7
2,817,970	+		AO356_12335	0.18	-0.8
2,817,970	+		AO356_12335	0.18	+0.0
2,817,970	+		AO356_12335	0.18	-0.5
2,817,970	+		AO356_12335	0.18	-0.4
2,817,970	+		AO356_12335	0.18	-0.6
2,817,970	+		AO356_12335	0.18	-0.6
2,817,971	-		AO356_12335	0.18	+0.5
2,817,971	-		AO356_12335	0.18	+0.3
2,817,971	-		AO356_12335	0.18	-0.7
2,817,971	-		AO356_12335	0.18	+0.8
2,817,971	-		AO356_12335	0.18	+0.5
2,818,113	-		AO356_12335	0.38	+0.7
2,818,121	+		AO356_12335	0.39	+0.5
2,818,121	+		AO356_12335	0.39	-2.3
2,818,121	+		AO356_12335	0.39	-1.0
2,818,121	+		AO356_12335	0.39	+0.5
2,818,122	-		AO356_12335	0.39	-0.6
2,818,122	-		AO356_12335	0.39	+1.5
2,818,122	-		AO356_12335	0.39	-1.6
2,818,122	-		AO356_12335	0.39	-0.3
2,818,122	-		AO356_12335	0.39	-0.1
2,818,278	+		AO356_12335	0.61	-1.0
2,818,278	+		AO356_12335	0.61	+0.2
2,818,278	+		AO356_12335	0.61	+0.0
2,818,279	-		AO356_12335	0.61	-0.2