Experiment: Cholin acetate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02325 and AO356_02330 are separated by 30 nucleotides AO356_02330 and AO356_02335 are separated by 590 nucleotides
AO356_02325: AO356_02325 - 3-ketoacyl-CoA thiolase, at 502,313 to 503,488
_02325
AO356_02330: AO356_02330 - multifunctional fatty acid oxidation complex subunit alpha, at 503,519 to 505,666
_02330
AO356_02335: AO356_02335 - hypothetical protein, at 506,257 to 506,694
_02335
Position (kb) 503
504
505
506 Strain fitness (log2 ratio) -2
-1
0
1
2 at 502.633 kb on - strand, within AO356_02325 at 502.861 kb on - strand, within AO356_02325 at 503.473 kb on + strand at 503.489 kb on - strand at 503.489 kb on - strand at 503.489 kb on - strand at 503.489 kb on - strand at 503.489 kb on - strand at 503.505 kb on + strand at 503.599 kb on - strand at 503.689 kb on - strand at 503.689 kb on - strand at 505.700 kb on - strand at 505.700 kb on - strand at 505.796 kb on + strand at 505.849 kb on + strand at 505.890 kb on + strand at 505.914 kb on + strand at 505.914 kb on + strand at 505.933 kb on + strand at 505.972 kb on + strand at 505.972 kb on + strand at 505.972 kb on + strand at 505.972 kb on + strand at 505.972 kb on + strand at 505.973 kb on - strand at 505.973 kb on - strand at 505.999 kb on + strand at 506.028 kb on + strand at 506.028 kb on + strand at 506.029 kb on - strand at 506.150 kb on - strand at 506.150 kb on - strand at 506.157 kb on + strand at 506.324 kb on + strand, within AO356_02335 at 506.324 kb on + strand, within AO356_02335 at 506.324 kb on + strand, within AO356_02335 at 506.360 kb on + strand, within AO356_02335 at 506.360 kb on + strand, within AO356_02335 at 506.360 kb on + strand, within AO356_02335 at 506.502 kb on - strand, within AO356_02335 at 506.620 kb on + strand, within AO356_02335 at 506.620 kb on + strand, within AO356_02335 at 506.621 kb on - strand, within AO356_02335 at 506.653 kb on + strand at 506.654 kb on - strand at 506.654 kb on - strand at 506.654 kb on - strand at 506.654 kb on - strand at 506.654 kb on - strand at 506.654 kb on - strand at 506.654 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cholin acetate 40 mM remove 502,633 - AO356_02325 0.27 -0.5 502,861 - AO356_02325 0.47 +0.2 503,473 + +2.1 503,489 - +1.1 503,489 - +0.6 503,489 - +0.2 503,489 - +0.6 503,489 - +0.4 503,505 + -0.8 503,599 - -0.1 503,689 - -0.3 503,689 - +0.7 505,700 - +0.0 505,700 - +1.4 505,796 + -0.7 505,849 + -0.7 505,890 + -1.2 505,914 + +0.2 505,914 + -1.8 505,933 + +0.7 505,972 + +0.2 505,972 + -0.8 505,972 + +0.5 505,972 + -0.1 505,972 + -0.9 505,973 - -0.2 505,973 - -1.2 505,999 + -0.1 506,028 + +0.3 506,028 + -2.1 506,029 - -0.5 506,150 - +0.5 506,150 - +0.9 506,157 + -1.0 506,324 + AO356_02335 0.15 -1.0 506,324 + AO356_02335 0.15 +0.2 506,324 + AO356_02335 0.15 -0.8 506,360 + AO356_02335 0.24 -1.1 506,360 + AO356_02335 0.24 -0.5 506,360 + AO356_02335 0.24 +0.7 506,502 - AO356_02335 0.56 -0.8 506,620 + AO356_02335 0.83 -1.3 506,620 + AO356_02335 0.83 -0.6 506,621 - AO356_02335 0.83 +0.4 506,653 + -0.1 506,654 - -0.6 506,654 - +0.3 506,654 - -1.2 506,654 - -0.1 506,654 - -0.2 506,654 - -2.1 506,654 - +0.2
Or see this region's nucleotide sequence