Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3003

Experiment: A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.02 mg/ml
3,136,361	+		Ga0059261_3002	0.18	-0.2
3,136,362	-		Ga0059261_3002	0.19	+0.0
3,136,362	-		Ga0059261_3002	0.19	-0.4
3,136,643	+		Ga0059261_3002	0.43	-0.1
3,136,643	+		Ga0059261_3002	0.43	-0.5
3,136,643	+		Ga0059261_3002	0.43	-2.1
3,136,644	-				+0.6
3,136,644	-		Ga0059261_3002	0.43	+0.3
3,136,644	-		Ga0059261_3002	0.43	-0.8
3,136,644	-		Ga0059261_3002	0.43	+2.8
3,136,644	-		Ga0059261_3002	0.43	-0.2
3,136,644	-		Ga0059261_3002	0.43	+0.5
3,136,676	+		Ga0059261_3002	0.46	+0.5
3,136,676	+		Ga0059261_3002	0.46	-0.1
3,136,676	+		Ga0059261_3002	0.46	+0.3
3,136,676	+		Ga0059261_3002	0.46	+0.2
3,136,676	+		Ga0059261_3002	0.46	+0.3
3,136,676	+				+0.2
3,136,676	+		Ga0059261_3002	0.46	-0.4
3,136,676	+		Ga0059261_3002	0.46	-1.2
3,136,676	+		Ga0059261_3002	0.46	+1.6
3,136,676	+		Ga0059261_3002	0.46	+2.3
3,136,677	-		Ga0059261_3002	0.46	+0.1
3,136,677	-		Ga0059261_3002	0.46	-0.1
3,136,677	-		Ga0059261_3002	0.46	-0.3
3,136,677	-		Ga0059261_3002	0.46	-0.2
3,136,677	-		Ga0059261_3002	0.46	-0.2
3,136,677	-		Ga0059261_3002	0.46	+0.2
3,136,677	-		Ga0059261_3002	0.46	+0.6
3,136,677	-		Ga0059261_3002	0.46	-0.0
3,136,677	-		Ga0059261_3002	0.46	+0.5
3,136,677	-		Ga0059261_3002	0.46	-0.4
3,136,677	-		Ga0059261_3002	0.46	+1.0
3,136,678	+		Ga0059261_3002	0.46	-0.0
3,136,678	+		Ga0059261_3002	0.46	+0.4
3,136,678	+		Ga0059261_3002	0.46	-0.4
3,136,678	+		Ga0059261_3002	0.46	+0.0
3,136,679	-		Ga0059261_3002	0.46	-1.1
3,136,679	-		Ga0059261_3002	0.46	-0.1
3,136,679	-		Ga0059261_3002	0.46	-0.6
3,136,739	+		Ga0059261_3002	0.51	-0.9
3,136,740	-		Ga0059261_3002	0.51	-0.3
3,136,740	-		Ga0059261_3002	0.51	+0.6
3,136,740	-		Ga0059261_3002	0.51	+0.9
3,136,740	-		Ga0059261_3002	0.51	+0.2
3,137,027	-		Ga0059261_3002	0.76	-0.8
3,137,084	+		Ga0059261_3002	0.81	-0.6
3,137,108	+		Ga0059261_3002	0.83	+0.9
3,137,108	+		Ga0059261_3002	0.83	+1.1
3,137,108	+		Ga0059261_3002	0.83	-0.2
3,137,108	+		Ga0059261_3002	0.83	-1.9
3,137,109	-		Ga0059261_3002	0.83	+0.5
3,137,109	-		Ga0059261_3002	0.83	-0.2
3,137,109	-				+0.5
3,137,130	-		Ga0059261_3002	0.85	-0.8
3,137,130	-		Ga0059261_3002	0.85	+0.2
3,137,141	+		Ga0059261_3002	0.86	-0.9
3,137,141	+		Ga0059261_3002	0.86	+0.5
3,137,141	+		Ga0059261_3002	0.86	+0.3
3,137,141	+		Ga0059261_3002	0.86	-0.2
3,137,141	+		Ga0059261_3002	0.86	-0.1
3,137,141	+		Ga0059261_3002	0.86	+0.3
3,137,142	-		Ga0059261_3002	0.86	+0.0
3,137,142	-		Ga0059261_3002	0.86	-0.2
3,137,142	-		Ga0059261_3002	0.86	+0.4
3,137,142	-		Ga0059261_3002	0.86	+0.3
3,137,142	-		Ga0059261_3002	0.86	+1.2
3,137,142	-		Ga0059261_3002	0.86	+1.2
3,137,142	-		Ga0059261_3002	0.86	+1.0
3,137,142	-		Ga0059261_3002	0.86	-0.4
3,137,142	-		Ga0059261_3002	0.86	-0.3
3,137,142	-		Ga0059261_3002	0.86	+0.3
3,137,142	-		Ga0059261_3002	0.86	+0.3
3,137,195	+				+0.4
3,137,195	+				+0.4
3,137,195	+				-0.8
3,137,195	+				+0.2
3,137,196	-				+0.0
3,137,196	-				-0.3
3,137,196	-				-0.1
3,137,196	-				-1.1
3,137,196	-				-0.1
3,137,196	-				+0.0
3,137,196	-				-0.8
3,137,196	-				-0.8
3,137,196	-				+0.5
3,137,196	-				+1.8
3,137,196	-				+0.3
3,137,196	-				-0.6
3,137,196	-				+0.1
3,137,228	+				+0.2
3,137,228	+				+2.0
3,137,228	+				+1.2
3,137,228	+				-0.4
3,137,229	-				+0.8
3,137,229	-				+0.1
3,137,592	-		Ga0059261_3003	0.15	-0.2
3,137,664	+		Ga0059261_3003	0.20	-0.6
3,137,665	-		Ga0059261_3003	0.20	-0.1
3,137,665	-		Ga0059261_3003	0.20	+0.0
3,137,665	-		Ga0059261_3003	0.20	+0.1
3,137,665	-		Ga0059261_3003	0.20	+0.0
3,137,665	-		Ga0059261_3003	0.20	-1.5
3,137,685	+		Ga0059261_3003	0.22	-1.0
3,137,685	+		Ga0059261_3003	0.22	-0.3
3,137,685	+		Ga0059261_3003	0.22	-0.7
3,137,685	+		Ga0059261_3003	0.22	+0.6
3,137,685	+		Ga0059261_3003	0.22	+0.3
3,137,685	+		Ga0059261_3003	0.22	-0.6
3,137,686	-		Ga0059261_3003	0.22	+0.3
3,137,686	-				+1.2
3,137,686	-		Ga0059261_3003	0.22	+0.2
3,137,686	-		Ga0059261_3003	0.22	-0.1
3,137,797	+		Ga0059261_3003	0.29	+0.2
3,137,797	+		Ga0059261_3003	0.29	+1.1
3,137,797	+		Ga0059261_3003	0.29	-0.3
3,137,797	+		Ga0059261_3003	0.29	+0.2
3,137,797	+		Ga0059261_3003	0.29	-0.1
3,137,797	+		Ga0059261_3003	0.29	+0.7
3,137,797	+		Ga0059261_3003	0.29	-0.0
3,137,797	+		Ga0059261_3003	0.29	-0.6
3,137,797	+		Ga0059261_3003	0.29	-0.2
3,137,798	-		Ga0059261_3003	0.29	-0.2
3,137,798	-		Ga0059261_3003	0.29	+0.4
3,137,798	-		Ga0059261_3003	0.29	-0.8
3,137,798	-		Ga0059261_3003	0.29	+0.7
3,137,798	-		Ga0059261_3003	0.29	+0.4
3,137,798	-		Ga0059261_3003	0.29	+0.2
3,137,798	-		Ga0059261_3003	0.29	-0.2
3,137,798	-		Ga0059261_3003	0.29	-1.6
3,137,798	-		Ga0059261_3003	0.29	+0.0
3,137,835	+		Ga0059261_3003	0.31	+0.5
3,137,903	-				-0.4
3,137,967	+		Ga0059261_3003	0.40	-1.2
3,137,967	+		Ga0059261_3003	0.40	-0.3
3,137,968	-		Ga0059261_3003	0.40	-0.3
3,137,968	-		Ga0059261_3003	0.40	+0.2
3,137,968	-		Ga0059261_3003	0.40	-0.4
3,137,968	-		Ga0059261_3003	0.40	+0.1
3,137,973	+		Ga0059261_3003	0.40	-0.3
3,137,974	-		Ga0059261_3003	0.41	-0.1
3,137,974	-		Ga0059261_3003	0.41	-0.1
3,137,974	-		Ga0059261_3003	0.41	-0.2
3,137,974	-		Ga0059261_3003	0.41	+1.4
3,137,974	-		Ga0059261_3003	0.41	-0.2
3,138,040	+		Ga0059261_3003	0.45	-1.8
3,138,219	+		Ga0059261_3003	0.57	-0.0
3,138,219	+		Ga0059261_3003	0.57	+0.1
3,138,219	+		Ga0059261_3003	0.57	+0.2
3,138,219	+		Ga0059261_3003	0.57	+0.0
3,138,219	+		Ga0059261_3003	0.57	+0.3
3,138,219	+		Ga0059261_3003	0.57	+0.4
3,138,219	+		Ga0059261_3003	0.57	-0.8
3,138,219	+		Ga0059261_3003	0.57	+0.6
3,138,219	+		Ga0059261_3003	0.57	-1.5
3,138,220	-		Ga0059261_3003	0.57	+0.7
3,138,220	-		Ga0059261_3003	0.57	+0.2
3,138,220	-		Ga0059261_3003	0.57	+0.8
3,138,220	-		Ga0059261_3003	0.57	-1.1
3,138,220	-		Ga0059261_3003	0.57	+0.4
3,138,247	+		Ga0059261_3003	0.59	-0.3
3,138,247	+		Ga0059261_3003	0.59	-0.4
3,138,247	+		Ga0059261_3003	0.59	-0.2
3,138,247	+		Ga0059261_3003	0.59	-0.5
3,138,248	-		Ga0059261_3003	0.59	+0.0
3,138,248	-		Ga0059261_3003	0.59	-0.9
3,138,248	-		Ga0059261_3003	0.59	-0.1
3,138,248	-		Ga0059261_3003	0.59	+0.2
3,138,248	-		Ga0059261_3003	0.59	-2.0
3,138,249	+		Ga0059261_3003	0.59	+0.3
3,138,249	+		Ga0059261_3003	0.59	-0.3
3,138,249	+		Ga0059261_3003	0.59	-1.1
3,138,249	+		Ga0059261_3003	0.59	-0.6
3,138,250	-		Ga0059261_3003	0.59	+0.2
3,138,250	-		Ga0059261_3003	0.59	-1.1
3,138,250	-		Ga0059261_3003	0.59	-0.1
3,138,250	-		Ga0059261_3003	0.59	+0.8
3,138,267	+		Ga0059261_3003	0.60	+0.1
3,138,346	+		Ga0059261_3003	0.65	+0.3
3,138,346	+		Ga0059261_3003	0.65	-0.7
3,138,346	+		Ga0059261_3003	0.65	-0.5
3,138,347	-		Ga0059261_3003	0.65	-0.4
3,138,347	-		Ga0059261_3003	0.65	+0.1
3,138,347	-		Ga0059261_3003	0.65	+0.7
3,138,347	-		Ga0059261_3003	0.65	-0.1
3,138,347	-		Ga0059261_3003	0.65	+0.0
3,138,348	+		Ga0059261_3003	0.65	+1.2
3,138,348	+		Ga0059261_3003	0.65	+0.2
3,138,348	+		Ga0059261_3003	0.65	-0.1
3,138,348	+		Ga0059261_3003	0.65	-0.2
3,138,349	-		Ga0059261_3003	0.65	-0.2
3,138,349	-		Ga0059261_3003	0.65	-0.6
3,138,349	-		Ga0059261_3003	0.65	-0.1
3,138,561	+		Ga0059261_3003	0.79	-0.7
3,138,561	+		Ga0059261_3003	0.79	-0.2
3,138,561	+		Ga0059261_3003	0.79	-0.7
3,138,561	+		Ga0059261_3003	0.79	-0.4
3,138,561	+		Ga0059261_3003	0.79	-0.5
3,138,561	+		Ga0059261_3003	0.79	-1.4
3,138,561	+		Ga0059261_3003	0.79	+0.1
3,138,561	+		Ga0059261_3003	0.79	+1.2
3,138,561	+		Ga0059261_3003	0.79	+0.9
3,138,561	+		Ga0059261_3003	0.79	+0.7
3,138,561	+		Ga0059261_3003	0.79	-1.0
3,138,561	+		Ga0059261_3003	0.79	-0.1
3,138,561	+		Ga0059261_3003	0.79	-1.3
3,138,561	+		Ga0059261_3003	0.79	+0.0
3,138,561	+		Ga0059261_3003	0.79	-0.9
3,138,562	-		Ga0059261_3003	0.79	-0.4
3,138,562	-		Ga0059261_3003	0.79	+0.6
3,138,562	-		Ga0059261_3003	0.79	-0.3
3,138,562	-		Ga0059261_3003	0.79	+0.1
3,138,564	+		Ga0059261_3003	0.79	+1.0
3,138,564	+		Ga0059261_3003	0.79	+0.1
3,138,564	+		Ga0059261_3003	0.79	-0.3
3,138,564	+		Ga0059261_3003	0.79	-0.2
3,138,564	+		Ga0059261_3003	0.79	-0.0
3,138,565	-		Ga0059261_3003	0.79	+0.4
3,138,565	-		Ga0059261_3003	0.79	-0.1
3,138,565	-		Ga0059261_3003	0.79	-0.3
3,138,565	-		Ga0059261_3003	0.79	+0.6
3,138,768	+				-0.3
3,138,768	+				-0.4
3,138,768	+				+1.6
3,138,768	+				-0.4
3,138,768	+				+0.1
3,138,768	+				+0.2
3,138,768	+				+0.5
3,138,768	+				+0.1
3,138,769	-				+0.1
3,138,769	-				-0.8
3,138,769	-				+0.7
3,138,769	-				-0.4
3,138,769	-				-0.8
3,138,769	-				-0.2
3,138,769	-				-0.2
3,138,911	+				-0.3
3,138,911	+				+0.3
3,138,911	+				+0.5
3,138,911	+				-0.0
3,138,912	-				-1.0
3,138,912	-				-0.5
3,138,912	-				-0.4
3,138,912	-				-0.4
3,138,920	+				+0.6
3,138,920	+				+0.0
3,138,921	-				-0.7
3,138,921	-				-0.5
3,139,141	-				-0.1
3,139,141	-				-0.6
3,139,141	-				-0.4
3,139,378	+		Ga0059261_3004	0.16	+0.2
3,139,378	+		Ga0059261_3004	0.16	+0.7
3,139,378	+		Ga0059261_3004	0.16	+0.4
3,139,378	+		Ga0059261_3004	0.16	-0.6
3,139,379	-		Ga0059261_3004	0.16	+1.0
3,139,379	-		Ga0059261_3004	0.16	-0.3
3,139,379	-				+0.2
3,139,379	-		Ga0059261_3004	0.16	-0.7
3,139,379	-		Ga0059261_3004	0.16	-0.5
3,139,392	+		Ga0059261_3004	0.17	+0.2
3,139,392	+		Ga0059261_3004	0.17	+0.2
3,139,393	-		Ga0059261_3004	0.17	-0.8
3,139,398	+		Ga0059261_3004	0.18	+0.9
3,139,398	+				+0.8
3,139,398	+		Ga0059261_3004	0.18	+0.1
3,139,398	+		Ga0059261_3004	0.18	+0.7
3,139,398	+		Ga0059261_3004	0.18	+0.2
3,139,398	+		Ga0059261_3004	0.18	+0.6
3,139,399	-		Ga0059261_3004	0.18	-0.8
3,139,542	+		Ga0059261_3004	0.27	+0.4
3,139,542	+		Ga0059261_3004	0.27	+0.8
3,139,542	+		Ga0059261_3004	0.27	+0.9
3,139,542	+		Ga0059261_3004	0.27	+0.6
3,139,542	+		Ga0059261_3004	0.27	+0.2
3,139,542	+		Ga0059261_3004	0.27	+0.4
3,139,543	-		Ga0059261_3004	0.27	+0.2
3,139,543	-		Ga0059261_3004	0.27	-1.2
3,139,543	-		Ga0059261_3004	0.27	+1.3
3,139,543	-		Ga0059261_3004	0.27	-0.6
3,139,700	+		Ga0059261_3004	0.38	-0.6
3,139,700	+		Ga0059261_3004	0.38	-0.3
3,139,701	-				+2.8
3,139,701	-		Ga0059261_3004	0.38	-0.2
3,139,740	+		Ga0059261_3004	0.40	-0.7
3,139,740	+		Ga0059261_3004	0.40	-0.7
3,139,740	+		Ga0059261_3004	0.40	+0.1
3,139,740	+		Ga0059261_3004	0.40	+0.6
3,139,741	-		Ga0059261_3004	0.40	-0.1
3,139,741	-		Ga0059261_3004	0.40	-0.0
3,139,741	-		Ga0059261_3004	0.40	+0.7
3,139,741	-		Ga0059261_3004	0.40	-0.0
3,139,749	+		Ga0059261_3004	0.41	-0.1
3,139,749	+		Ga0059261_3004	0.41	-1.0
3,139,749	+		Ga0059261_3004	0.41	-0.3
3,139,749	+		Ga0059261_3004	0.41	-0.5
3,139,750	-		Ga0059261_3004	0.41	+0.4
3,139,770	+		Ga0059261_3004	0.42	+0.1
3,139,770	+		Ga0059261_3004	0.42	-0.4
3,139,770	+		Ga0059261_3004	0.42	-0.6
3,139,770	+		Ga0059261_3004	0.42	+0.1
3,139,770	+		Ga0059261_3004	0.42	-0.2
3,139,770	+		Ga0059261_3004	0.42	+0.8
3,139,771	-		Ga0059261_3004	0.42	+0.0
3,139,771	-		Ga0059261_3004	0.42	+0.2
3,139,771	-		Ga0059261_3004	0.42	+0.6
3,139,809	+				+1.2
3,139,809	+		Ga0059261_3004	0.45	+0.7
3,139,809	+		Ga0059261_3004	0.45	+0.6
3,139,809	+		Ga0059261_3004	0.45	+0.7
3,139,809	+		Ga0059261_3004	0.45	+0.4
3,139,809	+		Ga0059261_3004	0.45	+0.3
3,139,809	+		Ga0059261_3004	0.45	+1.4
3,139,809	+		Ga0059261_3004	0.45	-0.4
3,139,810	-		Ga0059261_3004	0.45	-0.5
3,139,810	-		Ga0059261_3004	0.45	-0.5
3,139,810	-		Ga0059261_3004	0.45	-1.1
3,139,810	-		Ga0059261_3004	0.45	+0.2
3,139,810	-		Ga0059261_3004	0.45	+1.1
3,139,810	-		Ga0059261_3004	0.45	+0.2
3,139,810	-		Ga0059261_3004	0.45	-0.5
3,139,810	-		Ga0059261_3004	0.45	-0.0
3,139,810	-		Ga0059261_3004	0.45	+0.8
3,139,811	+		Ga0059261_3004	0.45	+0.6
3,139,811	+		Ga0059261_3004	0.45	-0.5
3,139,811	+		Ga0059261_3004	0.45	+0.3
3,139,812	-		Ga0059261_3004	0.45	-1.4