Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2415

Experiment: A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.02 mg/ml
2,507,544	+		Ga0059261_2412	0.84	+1.1
2,507,577	+		Ga0059261_2412	0.86	+1.3
2,507,632	+		Ga0059261_2412	0.89	+0.3
2,507,632	+		Ga0059261_2412	0.89	-0.1
2,507,633	-		Ga0059261_2412	0.89	+0.5
2,507,658	+				+0.3
2,507,658	+				+0.7
2,507,659	-				-0.1
2,507,670	+				+0.1
2,507,670	+				+0.3
2,507,671	-				+0.2
2,507,671	-				-0.7
2,507,671	-				-0.1
2,507,671	-				-1.5
2,507,757	+				+0.2
2,507,758	-				+0.8
2,507,758	-				+0.9
2,507,758	-				+0.4
2,507,922	+				+0.4
2,507,922	+				-0.7
2,507,923	-				+0.1
2,507,923	-				+0.4
2,507,995	-		Ga0059261_2413	0.38	+0.6
2,508,135	+				-1.3
2,508,135	+				+0.8
2,508,135	+				-0.1
2,508,135	+				+0.4
2,508,136	-				+1.3
2,508,136	-				+0.1
2,508,136	-				+0.9
2,508,136	-				+0.5
2,508,136	-				-0.0
2,508,136	-				-0.4
2,508,136	-				-0.3
2,508,136	-				-0.6
2,508,140	+				-0.3
2,508,140	+				+0.1
2,508,140	+				+0.2
2,508,140	+				+1.7
2,508,141	-				+0.7
2,508,141	-				+1.0
2,508,141	-				+1.5
2,508,141	-				+1.9
2,508,143	+				+0.0
2,508,143	+				+0.5
2,508,144	-				+0.8
2,508,144	-				+0.3
2,508,325	+				+1.0
2,508,336	+				-0.5
2,508,336	+				+0.3
2,508,337	-				+0.3
2,508,337	-				+1.3
2,508,349	+				+0.3
2,508,349	+				-0.1
2,508,350	-				+0.5
2,508,350	-				+0.7
2,508,350	-				+0.7
2,508,389	+				-0.2
2,508,434	+				+0.1
2,508,434	+				-1.3
2,508,434	+				+0.9
2,508,435	-				+1.3
2,508,566	+		Ga0059261_2415	0.19	+1.9
2,508,566	+		Ga0059261_2415	0.19	+0.2
2,508,567	-		Ga0059261_2415	0.19	+1.0
2,508,567	-		Ga0059261_2415	0.19	-0.2
2,508,567	-		Ga0059261_2415	0.19	-0.3
2,508,567	-		Ga0059261_2415	0.19	+0.0
2,508,567	-		Ga0059261_2415	0.19	+0.9
2,508,567	-		Ga0059261_2415	0.19	+0.2
2,508,567	-		Ga0059261_2415	0.19	+0.7
2,508,567	-		Ga0059261_2415	0.19	-1.4
2,508,567	-		Ga0059261_2415	0.19	+0.0
2,508,644	+		Ga0059261_2415	0.27	+0.1
2,508,644	+		Ga0059261_2415	0.27	-0.1
2,508,711	+		Ga0059261_2415	0.34	+0.4
2,508,711	+		Ga0059261_2415	0.34	+0.5
2,508,711	+		Ga0059261_2415	0.34	+1.3
2,508,711	+		Ga0059261_2415	0.34	+0.3
2,508,711	+		Ga0059261_2415	0.34	+1.4
2,508,711	+		Ga0059261_2415	0.34	-0.3
2,508,712	-		Ga0059261_2415	0.34	-0.5
2,508,712	-		Ga0059261_2415	0.34	+0.4
2,508,712	-		Ga0059261_2415	0.34	+0.5
2,508,712	-		Ga0059261_2415	0.34	+1.9
2,508,712	-		Ga0059261_2415	0.34	-0.3
2,508,712	-		Ga0059261_2415	0.34	-0.9
2,508,712	-		Ga0059261_2415	0.34	-2.1
2,508,729	+		Ga0059261_2415	0.36	-0.4
2,508,730	-		Ga0059261_2415	0.36	+0.8
2,508,761	+		Ga0059261_2415	0.40	-0.4
2,508,762	-		Ga0059261_2415	0.40	-0.1
2,508,762	-		Ga0059261_2415	0.40	-0.7
2,508,762	-		Ga0059261_2415	0.40	+0.5
2,508,762	-		Ga0059261_2415	0.40	+0.1
2,508,762	-		Ga0059261_2415	0.40	+1.1
2,508,762	-		Ga0059261_2415	0.40	+1.3
2,508,762	-		Ga0059261_2415	0.40	+1.0
2,508,762	-		Ga0059261_2415	0.40	+0.3
2,508,805	-		Ga0059261_2415	0.44	+1.0
2,508,920	+		Ga0059261_2415	0.56	+1.6
2,508,920	+		Ga0059261_2415	0.56	+0.9
2,508,920	+		Ga0059261_2415	0.56	-0.0
2,508,920	+		Ga0059261_2415	0.56	-0.9
2,508,920	+		Ga0059261_2415	0.56	-0.0
2,508,921	-		Ga0059261_2415	0.57	+0.7
2,508,921	-		Ga0059261_2415	0.57	-0.7
2,508,921	-		Ga0059261_2415	0.57	+1.8
2,508,921	-		Ga0059261_2415	0.57	+0.7
2,508,921	-		Ga0059261_2415	0.57	+1.0
2,508,921	-		Ga0059261_2415	0.57	+0.1
2,508,926	+		Ga0059261_2415	0.57	+0.2
2,508,927	-		Ga0059261_2415	0.57	+0.4
2,508,927	-		Ga0059261_2415	0.57	+1.2
2,509,202	+		Ga0059261_2415	0.86	-0.8
2,509,202	+		Ga0059261_2415	0.86	+0.1
2,509,202	+		Ga0059261_2415	0.86	+0.3
2,509,202	+		Ga0059261_2415	0.86	+0.5
2,509,202	+		Ga0059261_2415	0.86	-0.7
2,509,202	+		Ga0059261_2415	0.86	+0.5
2,509,202	+		Ga0059261_2415	0.86	+1.1
2,509,202	+		Ga0059261_2415	0.86	+0.8
2,509,202	+		Ga0059261_2415	0.86	+0.9
2,509,202	+		Ga0059261_2415	0.86	+1.1
2,509,203	-		Ga0059261_2415	0.87	+0.8
2,509,203	-		Ga0059261_2415	0.87	-0.2
2,509,203	-		Ga0059261_2415	0.87	+1.5
2,509,203	-		Ga0059261_2415	0.87	+0.5
2,509,203	-		Ga0059261_2415	0.87	+1.1
2,509,203	-		Ga0059261_2415	0.87	+0.7
2,509,203	-		Ga0059261_2415	0.87	-0.3
2,509,203	-		Ga0059261_2415	0.87	+0.3
2,509,203	-		Ga0059261_2415	0.87	+0.0
2,509,282	-				+0.5
2,509,282	-				+0.4
2,509,492	+		Ga0059261_2416	0.28	+1.5
2,509,492	+		Ga0059261_2416	0.28	+0.3
2,509,492	+		Ga0059261_2416	0.28	-0.2
2,509,493	-		Ga0059261_2416	0.28	+1.3
2,509,493	-		Ga0059261_2416	0.28	+0.3
2,509,493	-		Ga0059261_2416	0.28	+0.4
2,509,493	-		Ga0059261_2416	0.28	+0.3
2,509,493	-		Ga0059261_2416	0.28	+0.2
2,509,493	-		Ga0059261_2416	0.28	+0.1
2,509,795	+		Ga0059261_2416	0.79	+0.3
2,509,795	+		Ga0059261_2416	0.79	+0.5
2,509,795	+		Ga0059261_2416	0.79	+1.3
2,509,796	-		Ga0059261_2416	0.80	+0.2
2,509,796	-		Ga0059261_2416	0.80	+0.8
2,509,796	-		Ga0059261_2416	0.80	+0.5
2,509,855	+		Ga0059261_2416	0.90	+0.3
2,509,855	+		Ga0059261_2416	0.90	+0.5
2,509,855	+		Ga0059261_2416	0.90	-0.1
2,509,855	+		Ga0059261_2416	0.90	+0.1
2,509,856	-		Ga0059261_2416	0.90	+0.4
2,509,856	-		Ga0059261_2416	0.90	-0.3
2,509,888	+				+0.0
2,509,888	+				-0.2
2,509,888	+				+1.4
2,509,888	+				+1.3
2,509,888	+				+1.0
2,509,888	+				+0.0
2,509,888	+				-0.7
2,509,889	-				+0.8
2,509,889	-				+0.3
2,510,007	+				-0.3
2,510,007	+				-1.3
2,510,008	-				+1.5
2,510,008	-				-1.7
2,510,008	-				-1.1
2,510,008	-				-1.3
2,510,277	+		Ga0059261_2417	0.25	-1.1