Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2117

Experiment: A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.02 mg/ml
2,229,961	+		Ga0059261_2116	0.46	+1.3
2,229,961	+		Ga0059261_2116	0.46	+0.6
2,229,961	+		Ga0059261_2116	0.46	+0.3
2,229,961	+		Ga0059261_2116	0.46	+0.1
2,229,962	-		Ga0059261_2116	0.47	+0.2
2,229,962	-				+0.3
2,229,962	-				+1.3
2,230,029	+		Ga0059261_2116	0.55	+1.3
2,230,029	+		Ga0059261_2116	0.55	+0.8
2,230,029	+		Ga0059261_2116	0.55	+2.3
2,230,029	+		Ga0059261_2116	0.55	-0.7
2,230,029	+		Ga0059261_2116	0.55	+0.8
2,230,030	-		Ga0059261_2116	0.55	-0.1
2,230,030	-		Ga0059261_2116	0.55	+1.3
2,230,030	-		Ga0059261_2116	0.55	+0.7
2,230,039	+		Ga0059261_2116	0.56	+0.4
2,230,039	+		Ga0059261_2116	0.56	+0.7
2,230,040	-		Ga0059261_2116	0.56	+0.7
2,230,040	-		Ga0059261_2116	0.56	+0.5
2,230,040	-		Ga0059261_2116	0.56	+0.5
2,230,040	-		Ga0059261_2116	0.56	-0.2
2,230,147	+		Ga0059261_2116	0.69	+0.6
2,230,147	+		Ga0059261_2116	0.69	+0.2
2,230,147	+		Ga0059261_2116	0.69	-0.2
2,230,147	+		Ga0059261_2116	0.69	-1.5
2,230,148	-		Ga0059261_2116	0.69	-1.7
2,230,148	-		Ga0059261_2116	0.69	-2.2
2,230,148	-		Ga0059261_2116	0.69	+0.7
2,230,148	-		Ga0059261_2116	0.69	-0.1
2,230,148	-		Ga0059261_2116	0.69	+0.1
2,230,177	+		Ga0059261_2116	0.72	+0.4
2,230,177	+		Ga0059261_2116	0.72	-0.3
2,230,177	+		Ga0059261_2116	0.72	+0.6
2,230,177	+		Ga0059261_2116	0.72	+0.8
2,230,178	-		Ga0059261_2116	0.72	-0.0
2,230,178	-		Ga0059261_2116	0.72	+0.3
2,230,178	-		Ga0059261_2116	0.72	+2.6
2,230,178	-		Ga0059261_2116	0.72	-0.7
2,230,178	-		Ga0059261_2116	0.72	-0.1
2,230,270	+		Ga0059261_2116	0.83	+0.1
2,230,270	+		Ga0059261_2116	0.83	-0.3
2,230,270	+		Ga0059261_2116	0.83	-0.1
2,230,270	+		Ga0059261_2116	0.83	+0.3
2,230,270	+		Ga0059261_2116	0.83	+1.3
2,230,270	+		Ga0059261_2116	0.83	-0.5
2,230,270	+		Ga0059261_2116	0.83	+1.1
2,230,271	-		Ga0059261_2116	0.83	+0.9
2,230,271	-		Ga0059261_2116	0.83	+0.3
2,230,271	-				+0.3
2,230,271	-		Ga0059261_2116	0.83	+1.3
2,230,271	-		Ga0059261_2116	0.83	-0.2
2,230,271	-		Ga0059261_2116	0.83	+1.4
2,230,271	-		Ga0059261_2116	0.83	-0.3
2,230,271	-		Ga0059261_2116	0.83	+0.9
2,230,271	-		Ga0059261_2116	0.83	+1.4
2,230,272	+		Ga0059261_2116	0.84	+1.6
2,230,272	+		Ga0059261_2116	0.84	+1.0
2,230,272	+		Ga0059261_2116	0.84	+0.7
2,230,272	+		Ga0059261_2116	0.84	+1.3
2,230,272	+		Ga0059261_2116	0.84	+2.0
2,230,272	+		Ga0059261_2116	0.84	+0.3
2,230,272	+		Ga0059261_2116	0.84	+0.7
2,230,272	+		Ga0059261_2116	0.84	+1.2
2,230,272	+		Ga0059261_2116	0.84	+0.5
2,230,272	+		Ga0059261_2116	0.84	+0.9
2,230,272	+		Ga0059261_2116	0.84	+1.0
2,230,272	+		Ga0059261_2116	0.84	+1.0
2,230,272	+		Ga0059261_2116	0.84	+1.5
2,230,272	+		Ga0059261_2116	0.84	+0.8
2,230,272	+		Ga0059261_2116	0.84	-0.1
2,230,272	+		Ga0059261_2116	0.84	+0.6
2,230,273	-				+0.3
2,230,273	-		Ga0059261_2116	0.84	+0.7
2,230,273	-		Ga0059261_2116	0.84	+1.3
2,230,273	-		Ga0059261_2116	0.84	+1.5
2,230,273	-		Ga0059261_2116	0.84	-1.0
2,230,273	-		Ga0059261_2116	0.84	+0.4
2,230,273	-		Ga0059261_2116	0.84	+1.9
2,230,273	-		Ga0059261_2116	0.84	-0.3
2,230,276	+		Ga0059261_2116	0.84	+0.8
2,230,276	+		Ga0059261_2116	0.84	+0.4
2,230,276	+		Ga0059261_2116	0.84	+0.3
2,230,277	-		Ga0059261_2116	0.84	-0.9
2,230,375	+				+0.8
2,230,376	-				+0.1
2,230,399	+				-0.0
2,230,399	+				+2.6
2,230,399	+				+0.6
2,230,400	-				+1.6
2,230,400	-				+0.3
2,230,406	+				+0.6
2,230,414	+				+1.4
2,230,415	-				+2.0
2,230,490	+				+1.3
2,230,490	+				+1.0
2,230,490	+				+2.1
2,230,491	-				+1.3
2,230,491	-				-0.3
2,230,491	-				-0.0
2,230,491	-				+0.3
2,230,491	-				+2.3
2,230,542	+				+1.9
2,230,542	+				+0.8
2,230,542	+				-0.3
2,230,542	+				+0.4
2,230,542	+				+0.4
2,230,542	+				-1.3
2,230,542	+				+0.6
2,230,542	+				+0.2
2,230,542	+				+1.3
2,230,542	+				+0.6
2,230,542	+				-0.3
2,230,542	+				+1.2
2,230,542	+				-0.7
2,230,543	-				+0.3
2,230,543	-				+0.6
2,230,543	-				+0.7
2,230,543	-				-0.0
2,230,543	-				-0.0
2,230,543	-				+1.9
2,230,612	+				+1.3
2,230,612	+				+0.3
2,230,612	+				+1.6
2,230,612	+				+1.3
2,230,612	+				+0.3
2,230,612	+				+0.3
2,230,613	-				+0.3
2,230,613	-				+0.9
2,230,623	-				+0.8
2,230,650	-				+0.9
2,230,650	-				+1.3
2,230,685	+				+2.6
2,230,685	+				-0.1
2,230,685	+				+0.4
2,230,685	+				+0.0
2,230,685	+				+1.3
2,230,685	+				+0.6
2,230,686	-				+0.4
2,230,686	-				+1.3
2,230,686	-				+0.4
2,230,686	-				-0.0
2,230,686	-				+1.3
2,230,686	-				+0.8
2,230,690	+				+0.5
2,230,691	-				+0.4
2,230,698	+				-0.2
2,230,698	+				+0.7
2,230,698	+				+0.4
2,230,698	+				+1.0
2,230,698	+				+1.3
2,230,698	+				-0.3
2,230,699	-				-0.4
2,230,699	-				+0.3
2,230,699	-				+0.3
2,230,699	-				+0.1
2,230,740	-				+1.1
2,231,487	+		Ga0059261_2117	0.46	+0.5
2,231,487	+		Ga0059261_2117	0.46	+1.6
2,231,487	+		Ga0059261_2117	0.46	+0.5
2,231,487	+		Ga0059261_2117	0.46	+0.6
2,231,487	+		Ga0059261_2117	0.46	+0.6
2,231,487	+				+2.9
2,231,487	+		Ga0059261_2117	0.46	+0.8
2,231,487	+		Ga0059261_2117	0.46	+1.3
2,231,487	+		Ga0059261_2117	0.46	+1.2
2,231,530	+		Ga0059261_2117	0.50	+0.9
2,231,530	+		Ga0059261_2117	0.50	+0.9
2,231,530	+		Ga0059261_2117	0.50	+0.8
2,231,530	+		Ga0059261_2117	0.50	+1.2
2,231,689	+		Ga0059261_2117	0.62	+0.8
2,231,689	+		Ga0059261_2117	0.62	+1.3
2,231,689	+		Ga0059261_2117	0.62	+1.1
2,231,689	+		Ga0059261_2117	0.62	+0.1
2,231,689	+		Ga0059261_2117	0.62	+1.4
2,231,689	+		Ga0059261_2117	0.62	+1.3
2,231,689	+		Ga0059261_2117	0.62	+0.3
2,231,690	-		Ga0059261_2117	0.62	-0.3
2,231,690	-		Ga0059261_2117	0.62	+0.4
2,231,690	-		Ga0059261_2117	0.62	-0.0
2,231,690	-		Ga0059261_2117	0.62	+0.8
2,231,690	-		Ga0059261_2117	0.62	+1.3
2,231,692	+		Ga0059261_2117	0.63	+0.9
2,231,692	+		Ga0059261_2117	0.63	+0.4
2,231,692	+		Ga0059261_2117	0.63	+1.9
2,231,693	-		Ga0059261_2117	0.63	+1.2
2,231,693	-		Ga0059261_2117	0.63	+1.1
2,231,693	-		Ga0059261_2117	0.63	+0.9
2,231,693	-		Ga0059261_2117	0.63	+0.3
2,231,693	-		Ga0059261_2117	0.63	+1.2
2,231,693	-		Ga0059261_2117	0.63	-0.7
2,231,731	+		Ga0059261_2117	0.66	+1.0
2,231,732	-		Ga0059261_2117	0.66	+0.7
2,231,732	-		Ga0059261_2117	0.66	+0.2
2,231,783	+		Ga0059261_2117	0.70	+3.9
2,231,783	+		Ga0059261_2117	0.70	+1.4
2,231,783	+		Ga0059261_2117	0.70	+0.0
2,231,784	-		Ga0059261_2117	0.70	+1.0
2,231,784	-		Ga0059261_2117	0.70	+0.0
2,231,784	-		Ga0059261_2117	0.70	-0.2
2,231,821	+		Ga0059261_2117	0.73	+0.8
2,231,822	-		Ga0059261_2117	0.73	+1.2
2,231,822	-		Ga0059261_2117	0.73	+0.1
2,231,822	-		Ga0059261_2117	0.73	+0.7
2,231,822	-		Ga0059261_2117	0.73	-1.3
2,231,880	+		Ga0059261_2117	0.78	+0.9
2,231,880	+		Ga0059261_2117	0.78	+0.8
2,231,880	+		Ga0059261_2117	0.78	+0.6
2,231,880	+		Ga0059261_2117	0.78	+1.7
2,231,880	+		Ga0059261_2117	0.78	+0.0
2,231,880	+		Ga0059261_2117	0.78	+1.7
2,231,880	+		Ga0059261_2117	0.78	-1.4
2,231,880	+		Ga0059261_2117	0.78	+1.3
2,231,881	-		Ga0059261_2117	0.78	+0.8
2,231,881	-		Ga0059261_2117	0.78	+0.9
2,231,881	-		Ga0059261_2117	0.78	-0.0
2,231,881	-		Ga0059261_2117	0.78	+0.2
2,231,881	-		Ga0059261_2117	0.78	+0.1
2,231,881	-		Ga0059261_2117	0.78	+0.3
2,231,901	+		Ga0059261_2117	0.80	+0.4
2,231,901	+		Ga0059261_2117	0.80	-0.5
2,231,902	-		Ga0059261_2117	0.80	+0.9
2,231,902	-		Ga0059261_2117	0.80	+2.0
2,231,906	+		Ga0059261_2117	0.80	+2.0
2,231,906	+		Ga0059261_2117	0.80	+0.3
2,231,906	+		Ga0059261_2117	0.80	+0.3
2,231,907	-		Ga0059261_2117	0.80	+2.9
2,231,907	-		Ga0059261_2117	0.80	+1.0
2,231,994	+		Ga0059261_2117	0.87	+0.2
2,231,995	-		Ga0059261_2117	0.87	+1.3
2,231,995	-		Ga0059261_2117	0.87	+1.4
2,231,995	-		Ga0059261_2117	0.87	+0.1
2,231,995	-		Ga0059261_2117	0.87	-0.7
2,232,026	+		Ga0059261_2117	0.90	+1.0
2,232,026	+		Ga0059261_2117	0.90	+2.3
2,232,026	+		Ga0059261_2117	0.90	+1.4
2,232,026	+		Ga0059261_2117	0.90	+0.1
2,232,026	+		Ga0059261_2117	0.90	+0.1
2,232,026	+		Ga0059261_2117	0.90	-0.0
2,232,027	-		Ga0059261_2117	0.90	+0.9
2,232,027	-		Ga0059261_2117	0.90	+1.6
2,232,027	-		Ga0059261_2117	0.90	+1.6
2,232,027	-		Ga0059261_2117	0.90	+0.7
2,232,027	-		Ga0059261_2117	0.90	+0.9
2,232,085	+				+1.3
2,232,086	-				+3.3
2,232,150	-				-1.9
2,232,177	+				+1.1
2,232,235	+				+2.5
2,232,235	+				+1.0
2,232,235	+				+0.3
2,232,235	+				+1.6
2,232,235	+				+1.1
2,232,235	+				+0.7
2,232,235	+				+2.0
2,232,235	+				+0.9
2,232,235	+				+0.7
2,232,235	+				+1.4
2,232,236	-				-0.5
2,232,236	-				+1.5
2,232,236	-				+0.1
2,232,236	-				-1.2
2,232,236	-				+1.3
2,232,236	-				+0.6
2,232,248	+				+0.8
2,232,249	-				+0.7
2,232,326	+				+1.8
2,232,327	-				+0.3
2,232,327	-				-0.1
2,232,327	-				+1.4
2,232,368	+				+1.7
2,232,369	-				+0.8
2,232,369	-				+0.7
2,232,369	-				+0.2
2,232,383	+				+1.4
2,232,383	+				+1.0
2,232,383	+				+0.9
2,232,383	+				+1.1
2,232,384	-				+0.2
2,232,384	-				+0.4
2,232,384	-				+1.1
2,232,384	-				-0.1
2,232,389	+				-0.0
2,232,389	+				+1.4
2,232,389	+				+3.3
2,232,389	+				-0.7
2,232,389	+				+1.0
2,232,389	+				+2.3
2,232,390	-				+0.0
2,232,390	-				+0.3
2,232,390	-				+0.9
2,232,390	-				-1.0
2,232,390	-				+1.1
2,232,390	-				+2.5
2,232,395	-				-0.5
2,232,435	+				+1.3
2,232,435	+				+1.1
2,232,436	-				+0.7
2,232,436	-				+0.6
2,232,441	+				+1.7
2,232,688	+		Ga0059261_2118	0.25	+0.0
2,232,688	+		Ga0059261_2118	0.25	+2.9
2,232,688	+		Ga0059261_2118	0.25	+2.1
2,232,688	+		Ga0059261_2118	0.25	+0.9
2,232,688	+		Ga0059261_2118	0.25	+1.0
2,232,688	+		Ga0059261_2118	0.25	+1.3
2,232,689	-		Ga0059261_2118	0.25	+0.4
2,232,689	-		Ga0059261_2118	0.25	+0.7
2,232,703	+		Ga0059261_2118	0.26	+2.1
2,232,703	+		Ga0059261_2118	0.26	+1.5
2,232,703	+		Ga0059261_2118	0.26	-0.0
2,232,704	-		Ga0059261_2118	0.27	-0.5
2,232,739	+		Ga0059261_2118	0.31	+2.3
2,232,818	-		Ga0059261_2118	0.40	+0.9
2,232,818	-		Ga0059261_2118	0.40	+1.0
2,232,865	-		Ga0059261_2118	0.45	+1.3
2,233,135	+		Ga0059261_2118	0.76	+0.4
2,233,135	+		Ga0059261_2118	0.76	+1.2
2,233,136	-		Ga0059261_2118	0.77	+1.1
2,233,136	-		Ga0059261_2118	0.77	+1.5