Experiment: A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1014 and Ga0059261_1015 overlap by 8 nucleotides Ga0059261_1015 and Ga0059261_1016 overlap by 21 nucleotides Ga0059261_1016 and Ga0059261_1017 are separated by 45 nucleotides
Ga0059261_1014: Ga0059261_1014 - cation diffusion facilitator family transporter, at 1,051,539 to 1,052,528
_1014
Ga0059261_1015: Ga0059261_1015 - Predicted phosphatases, at 1,052,521 to 1,053,180
_1015
Ga0059261_1016: Ga0059261_1016 - Cupin domain, at 1,053,160 to 1,053,483
_1016
Ga0059261_1017: Ga0059261_1017 - tRNA-guanine transglycosylase, at 1,053,529 to 1,054,656
_1017
Position (kb)
1052
1053
1054 Strain fitness (log2 ratio)
-1
0
1 at 1051.526 kb on + strand at 1051.527 kb on - strand at 1051.794 kb on + strand, within Ga0059261_1014 at 1051.794 kb on + strand, within Ga0059261_1014 at 1051.795 kb on - strand, within Ga0059261_1014 at 1052.000 kb on + strand, within Ga0059261_1014 at 1052.019 kb on + strand, within Ga0059261_1014 at 1052.019 kb on + strand, within Ga0059261_1014 at 1052.019 kb on + strand, within Ga0059261_1014 at 1052.020 kb on - strand, within Ga0059261_1014 at 1052.020 kb on - strand, within Ga0059261_1014 at 1052.048 kb on - strand, within Ga0059261_1014 at 1052.356 kb on + strand, within Ga0059261_1014 at 1052.356 kb on + strand, within Ga0059261_1014 at 1052.356 kb on + strand, within Ga0059261_1014 at 1052.356 kb on + strand, within Ga0059261_1014 at 1052.356 kb on + strand, within Ga0059261_1014 at 1052.357 kb on - strand, within Ga0059261_1014 at 1052.357 kb on - strand, within Ga0059261_1014 at 1052.630 kb on - strand, within Ga0059261_1015 at 1052.743 kb on + strand, within Ga0059261_1015 at 1052.743 kb on + strand, within Ga0059261_1015 at 1052.743 kb on + strand, within Ga0059261_1015 at 1052.743 kb on + strand, within Ga0059261_1015 at 1052.744 kb on - strand, within Ga0059261_1015 at 1052.744 kb on - strand, within Ga0059261_1015 at 1052.744 kb on - strand, within Ga0059261_1015 at 1053.027 kb on + strand, within Ga0059261_1015 at 1053.029 kb on + strand, within Ga0059261_1015 at 1053.072 kb on - strand, within Ga0059261_1015 at 1053.079 kb on + strand, within Ga0059261_1015 at 1053.079 kb on + strand at 1053.080 kb on - strand, within Ga0059261_1015 at 1053.421 kb on + strand, within Ga0059261_1016 at 1053.421 kb on + strand, within Ga0059261_1016 at 1053.422 kb on - strand, within Ga0059261_1016 at 1053.422 kb on - strand, within Ga0059261_1016 at 1053.558 kb on + strand at 1053.558 kb on + strand at 1053.650 kb on + strand, within Ga0059261_1017 at 1053.650 kb on + strand, within Ga0059261_1017 at 1053.651 kb on - strand, within Ga0059261_1017 at 1053.712 kb on + strand, within Ga0059261_1017 at 1053.712 kb on + strand, within Ga0059261_1017 at 1053.713 kb on - strand, within Ga0059261_1017 at 1053.713 kb on - strand, within Ga0059261_1017 at 1053.713 kb on - strand, within Ga0059261_1017 at 1053.713 kb on - strand, within Ga0059261_1017 at 1053.713 kb on - strand, within Ga0059261_1017 at 1053.713 kb on - strand, within Ga0059261_1017 at 1053.713 kb on - strand, within Ga0059261_1017 at 1053.814 kb on + strand, within Ga0059261_1017 at 1053.815 kb on - strand, within Ga0059261_1017 at 1054.174 kb on + strand, within Ga0059261_1017 at 1054.174 kb on + strand at 1054.174 kb on + strand, within Ga0059261_1017
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.02 mg/ml remove 1,051,526 + -0.3 1,051,527 - +0.1 1,051,794 + Ga0059261_1014 0.26 -0.4 1,051,794 + Ga0059261_1014 0.26 -0.7 1,051,795 - Ga0059261_1014 0.26 +0.3 1,052,000 + Ga0059261_1014 0.47 +0.4 1,052,019 + Ga0059261_1014 0.48 -0.3 1,052,019 + Ga0059261_1014 0.48 -0.8 1,052,019 + Ga0059261_1014 0.48 -0.3 1,052,020 - Ga0059261_1014 0.49 +0.3 1,052,020 - Ga0059261_1014 0.49 +0.5 1,052,048 - Ga0059261_1014 0.51 -0.8 1,052,356 + Ga0059261_1014 0.83 -0.7 1,052,356 + Ga0059261_1014 0.83 +0.3 1,052,356 + Ga0059261_1014 0.83 +0.5 1,052,356 + Ga0059261_1014 0.83 -0.6 1,052,356 + Ga0059261_1014 0.83 -0.0 1,052,357 - Ga0059261_1014 0.83 -0.3 1,052,357 - Ga0059261_1014 0.83 -0.2 1,052,630 - Ga0059261_1015 0.17 -0.6 1,052,743 + Ga0059261_1015 0.34 -0.2 1,052,743 + Ga0059261_1015 0.34 -0.6 1,052,743 + Ga0059261_1015 0.34 -0.6 1,052,743 + Ga0059261_1015 0.34 -1.3 1,052,744 - Ga0059261_1015 0.34 -0.8 1,052,744 - Ga0059261_1015 0.34 -0.6 1,052,744 - Ga0059261_1015 0.34 -0.4 1,053,027 + Ga0059261_1015 0.77 -0.4 1,053,029 + Ga0059261_1015 0.77 -0.4 1,053,072 - Ga0059261_1015 0.83 -0.8 1,053,079 + Ga0059261_1015 0.85 +0.2 1,053,079 + +1.0 1,053,080 - Ga0059261_1015 0.85 -0.8 1,053,421 + Ga0059261_1016 0.81 -0.5 1,053,421 + Ga0059261_1016 0.81 +0.0 1,053,422 - Ga0059261_1016 0.81 -0.6 1,053,422 - Ga0059261_1016 0.81 +0.0 1,053,558 + +0.5 1,053,558 + -0.3 1,053,650 + Ga0059261_1017 0.11 -0.6 1,053,650 + Ga0059261_1017 0.11 -0.6 1,053,651 - Ga0059261_1017 0.11 +0.7 1,053,712 + Ga0059261_1017 0.16 -0.7 1,053,712 + Ga0059261_1017 0.16 -0.6 1,053,713 - Ga0059261_1017 0.16 +0.3 1,053,713 - Ga0059261_1017 0.16 +0.0 1,053,713 - Ga0059261_1017 0.16 +0.0 1,053,713 - Ga0059261_1017 0.16 +0.8 1,053,713 - Ga0059261_1017 0.16 +0.0 1,053,713 - Ga0059261_1017 0.16 +0.6 1,053,713 - Ga0059261_1017 0.16 -0.4 1,053,814 + Ga0059261_1017 0.25 -0.3 1,053,815 - Ga0059261_1017 0.25 +0.5 1,054,174 + Ga0059261_1017 0.57 -0.1 1,054,174 + +1.0 1,054,174 + Ga0059261_1017 0.57 -0.6
Or see this region's nucleotide sequence