Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27850 and BWI76_RS27855 are separated by 223 nucleotides BWI76_RS27855 and BWI76_RS27860 are separated by 17 nucleotides
BWI76_RS27850: BWI76_RS27850 - DNA-binding transcriptional regulator DsdC, at 5,776,227 to 5,777,156
_RS27850
BWI76_RS27855: BWI76_RS27855 - D-serine transporter DsdX, at 5,777,380 to 5,778,717
_RS27855
BWI76_RS27860: BWI76_RS27860 - D-serine dehydratase, at 5,778,735 to 5,780,063
_RS27860
Position (kb) 5777
5778
5779 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5776.503 kb on + strand, within BWI76_RS27850 at 5776.799 kb on + strand, within BWI76_RS27850 at 5776.804 kb on + strand, within BWI76_RS27850 at 5776.804 kb on + strand, within BWI76_RS27850 at 5776.812 kb on - strand, within BWI76_RS27850 at 5777.023 kb on + strand, within BWI76_RS27850 at 5777.089 kb on + strand at 5777.410 kb on + strand at 5777.410 kb on + strand at 5777.418 kb on - strand at 5777.425 kb on + strand at 5777.442 kb on - strand at 5777.521 kb on - strand, within BWI76_RS27855 at 5777.666 kb on + strand, within BWI76_RS27855 at 5777.828 kb on - strand, within BWI76_RS27855 at 5777.997 kb on + strand, within BWI76_RS27855 at 5778.075 kb on + strand at 5778.075 kb on + strand, within BWI76_RS27855 at 5778.075 kb on + strand, within BWI76_RS27855 at 5778.075 kb on + strand, within BWI76_RS27855 at 5778.098 kb on + strand, within BWI76_RS27855 at 5778.574 kb on + strand, within BWI76_RS27855 at 5778.854 kb on - strand at 5778.854 kb on - strand at 5779.033 kb on + strand, within BWI76_RS27860 at 5779.167 kb on - strand, within BWI76_RS27860 at 5779.214 kb on + strand, within BWI76_RS27860 at 5779.222 kb on - strand, within BWI76_RS27860 at 5779.290 kb on - strand, within BWI76_RS27860 at 5779.296 kb on + strand, within BWI76_RS27860 at 5779.296 kb on + strand, within BWI76_RS27860 at 5779.304 kb on - strand, within BWI76_RS27860 at 5779.384 kb on - strand, within BWI76_RS27860 at 5779.417 kb on + strand, within BWI76_RS27860 at 5779.503 kb on - strand, within BWI76_RS27860 at 5779.692 kb on - strand, within BWI76_RS27860
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,776,503 + BWI76_RS27850 0.30 -0.5 5,776,799 + BWI76_RS27850 0.62 +0.6 5,776,804 + BWI76_RS27850 0.62 +0.8 5,776,804 + BWI76_RS27850 0.62 -0.7 5,776,812 - BWI76_RS27850 0.63 -0.0 5,777,023 + BWI76_RS27850 0.86 +0.3 5,777,089 + +0.2 5,777,410 + +0.8 5,777,410 + -1.1 5,777,418 - -0.6 5,777,425 + -1.3 5,777,442 - +0.8 5,777,521 - BWI76_RS27855 0.11 -0.2 5,777,666 + BWI76_RS27855 0.21 -0.7 5,777,828 - BWI76_RS27855 0.33 -0.5 5,777,997 + BWI76_RS27855 0.46 -0.3 5,778,075 + +1.5 5,778,075 + BWI76_RS27855 0.52 +0.3 5,778,075 + BWI76_RS27855 0.52 +1.2 5,778,075 + BWI76_RS27855 0.52 -0.3 5,778,098 + BWI76_RS27855 0.54 -0.3 5,778,574 + BWI76_RS27855 0.89 +0.5 5,778,854 - +0.3 5,778,854 - -1.8 5,779,033 + BWI76_RS27860 0.22 +0.2 5,779,167 - BWI76_RS27860 0.33 -0.8 5,779,214 + BWI76_RS27860 0.36 +0.2 5,779,222 - BWI76_RS27860 0.37 -0.9 5,779,290 - BWI76_RS27860 0.42 -0.8 5,779,296 + BWI76_RS27860 0.42 -2.1 5,779,296 + BWI76_RS27860 0.42 -2.7 5,779,304 - BWI76_RS27860 0.43 -2.3 5,779,384 - BWI76_RS27860 0.49 -2.7 5,779,417 + BWI76_RS27860 0.51 -1.5 5,779,503 - BWI76_RS27860 0.58 -1.4 5,779,692 - BWI76_RS27860 0.72 -3.1
Or see this region's nucleotide sequence