Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27250 and BWI76_RS27255 are separated by 9 nucleotides BWI76_RS27255 and BWI76_RS27260 are separated by 214 nucleotides
BWI76_RS27250: BWI76_RS27250 - L-threonine 3-dehydrogenase, at 5,655,478 to 5,656,503
_RS27250
BWI76_RS27255: BWI76_RS27255 - 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) <small>(from data)</small>, at 5,656,513 to 5,657,706
_RS27255
BWI76_RS27260: BWI76_RS27260 - ADP-L-glycero-D-mannoheptose-6-epimerase, at 5,657,921 to 5,658,853
_RS27260
Position (kb) 5656
5657
5658 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5655.525 kb on + strand at 5655.574 kb on - strand at 5655.605 kb on - strand, within BWI76_RS27250 at 5655.798 kb on - strand, within BWI76_RS27250 at 5655.798 kb on - strand, within BWI76_RS27250 at 5655.815 kb on + strand at 5655.823 kb on - strand, within BWI76_RS27250 at 5655.839 kb on + strand, within BWI76_RS27250 at 5655.887 kb on - strand, within BWI76_RS27250 at 5655.987 kb on - strand, within BWI76_RS27250 at 5655.987 kb on - strand, within BWI76_RS27250 at 5656.263 kb on + strand, within BWI76_RS27250 at 5656.271 kb on - strand, within BWI76_RS27250 at 5656.278 kb on + strand, within BWI76_RS27250 at 5656.278 kb on + strand, within BWI76_RS27250 at 5656.286 kb on - strand, within BWI76_RS27250 at 5656.311 kb on + strand, within BWI76_RS27250 at 5656.364 kb on - strand, within BWI76_RS27250 at 5656.388 kb on - strand, within BWI76_RS27250 at 5656.465 kb on + strand at 5656.510 kb on + strand at 5656.525 kb on + strand at 5656.545 kb on + strand at 5656.546 kb on + strand at 5656.560 kb on - strand at 5656.700 kb on + strand, within BWI76_RS27255 at 5656.718 kb on - strand, within BWI76_RS27255 at 5656.783 kb on + strand, within BWI76_RS27255 at 5657.029 kb on - strand, within BWI76_RS27255 at 5657.029 kb on - strand, within BWI76_RS27255 at 5657.134 kb on - strand, within BWI76_RS27255 at 5657.137 kb on + strand, within BWI76_RS27255 at 5657.153 kb on + strand, within BWI76_RS27255 at 5657.275 kb on - strand, within BWI76_RS27255 at 5657.277 kb on + strand, within BWI76_RS27255 at 5657.305 kb on + strand, within BWI76_RS27255 at 5657.313 kb on - strand, within BWI76_RS27255 at 5657.313 kb on - strand, within BWI76_RS27255 at 5657.394 kb on - strand, within BWI76_RS27255 at 5657.447 kb on - strand at 5657.529 kb on + strand, within BWI76_RS27255 at 5657.629 kb on - strand at 5657.663 kb on + strand at 5657.663 kb on + strand at 5657.671 kb on - strand at 5657.671 kb on - strand at 5657.673 kb on - strand at 5657.751 kb on + strand at 5657.758 kb on + strand at 5657.759 kb on - strand at 5657.759 kb on - strand at 5657.759 kb on - strand at 5657.759 kb on - strand at 5657.814 kb on + strand at 5657.815 kb on + strand at 5657.815 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,655,525 + +0.2 5,655,574 - +0.3 5,655,605 - BWI76_RS27250 0.12 +0.0 5,655,798 - BWI76_RS27250 0.31 +0.0 5,655,798 - BWI76_RS27250 0.31 +0.1 5,655,815 + -0.1 5,655,823 - BWI76_RS27250 0.34 +0.2 5,655,839 + BWI76_RS27250 0.35 +0.4 5,655,887 - BWI76_RS27250 0.40 -0.9 5,655,987 - BWI76_RS27250 0.50 -0.2 5,655,987 - BWI76_RS27250 0.50 -0.3 5,656,263 + BWI76_RS27250 0.77 +0.1 5,656,271 - BWI76_RS27250 0.77 -0.5 5,656,278 + BWI76_RS27250 0.78 -0.5 5,656,278 + BWI76_RS27250 0.78 +0.5 5,656,286 - BWI76_RS27250 0.79 +0.7 5,656,311 + BWI76_RS27250 0.81 +2.4 5,656,364 - BWI76_RS27250 0.86 -0.7 5,656,388 - BWI76_RS27250 0.89 +2.1 5,656,465 + +0.2 5,656,510 + +0.3 5,656,525 + +0.0 5,656,545 + +0.6 5,656,546 + +0.2 5,656,560 - +0.5 5,656,700 + BWI76_RS27255 0.16 -0.5 5,656,718 - BWI76_RS27255 0.17 -0.3 5,656,783 + BWI76_RS27255 0.23 +0.4 5,657,029 - BWI76_RS27255 0.43 +0.6 5,657,029 - BWI76_RS27255 0.43 +0.5 5,657,134 - BWI76_RS27255 0.52 +0.2 5,657,137 + BWI76_RS27255 0.52 +0.9 5,657,153 + BWI76_RS27255 0.54 -0.2 5,657,275 - BWI76_RS27255 0.64 -0.3 5,657,277 + BWI76_RS27255 0.64 +0.3 5,657,305 + BWI76_RS27255 0.66 +0.7 5,657,313 - BWI76_RS27255 0.67 -0.0 5,657,313 - BWI76_RS27255 0.67 -0.5 5,657,394 - BWI76_RS27255 0.74 -0.3 5,657,447 - +2.3 5,657,529 + BWI76_RS27255 0.85 +0.4 5,657,629 - +0.6 5,657,663 + -0.3 5,657,663 + -0.4 5,657,671 - -0.1 5,657,671 - +1.2 5,657,673 - -0.1 5,657,751 + -0.4 5,657,758 + +0.2 5,657,759 - +0.7 5,657,759 - -0.6 5,657,759 - +1.9 5,657,759 - -1.1 5,657,814 + -3.4 5,657,815 + +1.1 5,657,815 + +0.9
Or see this region's nucleotide sequence