Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27060 and BWI76_RS27065 are separated by 173 nucleotides BWI76_RS27065 and BWI76_RS27070 are separated by 101 nucleotides BWI76_RS27070 and BWI76_RS27075 are separated by 118 nucleotides
BWI76_RS27060: BWI76_RS27060 - alpha-amylase, at 5,614,459 to 5,616,492
_RS27060
BWI76_RS27065: BWI76_RS27065 - valine--pyruvate transaminase, at 5,616,666 to 5,617,925
_RS27065
BWI76_RS27070: BWI76_RS27070 - 4Fe-4S ferredoxin, at 5,618,027 to 5,618,515
_RS27070
BWI76_RS27075: BWI76_RS27075 - IclR family transcriptional regulator, at 5,618,634 to 5,619,452
_RS27075
Position (kb) 5616
5617
5618 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5615.700 kb on + strand, within BWI76_RS27060 at 5615.710 kb on - strand, within BWI76_RS27060 at 5615.760 kb on + strand, within BWI76_RS27060 at 5615.971 kb on + strand, within BWI76_RS27060 at 5616.033 kb on - strand, within BWI76_RS27060 at 5616.061 kb on + strand, within BWI76_RS27060 at 5616.155 kb on + strand, within BWI76_RS27060 at 5616.159 kb on - strand, within BWI76_RS27060 at 5616.215 kb on + strand, within BWI76_RS27060 at 5616.220 kb on + strand, within BWI76_RS27060 at 5616.220 kb on + strand, within BWI76_RS27060 at 5616.287 kb on - strand, within BWI76_RS27060 at 5616.346 kb on - strand at 5616.366 kb on + strand at 5616.427 kb on + strand at 5616.479 kb on - strand at 5616.481 kb on + strand at 5616.628 kb on - strand at 5616.842 kb on - strand, within BWI76_RS27065 at 5616.887 kb on + strand, within BWI76_RS27065 at 5616.902 kb on + strand, within BWI76_RS27065 at 5616.909 kb on - strand, within BWI76_RS27065 at 5617.003 kb on + strand, within BWI76_RS27065 at 5617.140 kb on - strand, within BWI76_RS27065 at 5617.234 kb on + strand, within BWI76_RS27065 at 5617.350 kb on + strand, within BWI76_RS27065 at 5617.506 kb on - strand, within BWI76_RS27065 at 5617.524 kb on + strand, within BWI76_RS27065 at 5617.575 kb on - strand, within BWI76_RS27065 at 5617.696 kb on + strand, within BWI76_RS27065 at 5617.697 kb on + strand, within BWI76_RS27065 at 5617.705 kb on - strand, within BWI76_RS27065 at 5617.763 kb on - strand, within BWI76_RS27065 at 5617.903 kb on + strand at 5617.913 kb on + strand at 5617.969 kb on - strand at 5618.091 kb on + strand, within BWI76_RS27070 at 5618.104 kb on - strand at 5618.185 kb on + strand, within BWI76_RS27070 at 5618.224 kb on + strand, within BWI76_RS27070 at 5618.234 kb on - strand, within BWI76_RS27070 at 5618.255 kb on + strand, within BWI76_RS27070 at 5618.413 kb on + strand, within BWI76_RS27070 at 5618.413 kb on + strand, within BWI76_RS27070 at 5618.421 kb on - strand, within BWI76_RS27070 at 5618.423 kb on + strand, within BWI76_RS27070 at 5618.431 kb on - strand, within BWI76_RS27070 at 5618.431 kb on - strand, within BWI76_RS27070 at 5618.431 kb on - strand, within BWI76_RS27070 at 5618.638 kb on + strand at 5618.800 kb on + strand, within BWI76_RS27075 at 5618.906 kb on - strand, within BWI76_RS27075
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,615,700 + BWI76_RS27060 0.61 -0.2 5,615,710 - BWI76_RS27060 0.62 +0.3 5,615,760 + BWI76_RS27060 0.64 -0.2 5,615,971 + BWI76_RS27060 0.74 -0.4 5,616,033 - BWI76_RS27060 0.77 -0.6 5,616,061 + BWI76_RS27060 0.79 +0.2 5,616,155 + BWI76_RS27060 0.83 -0.4 5,616,159 - BWI76_RS27060 0.84 +0.2 5,616,215 + BWI76_RS27060 0.86 +2.5 5,616,220 + BWI76_RS27060 0.87 +0.1 5,616,220 + BWI76_RS27060 0.87 -0.3 5,616,287 - BWI76_RS27060 0.90 -0.1 5,616,346 - -0.4 5,616,366 + -0.1 5,616,427 + -0.7 5,616,479 - +0.3 5,616,481 + -0.7 5,616,628 - +2.5 5,616,842 - BWI76_RS27065 0.14 -0.0 5,616,887 + BWI76_RS27065 0.18 +0.1 5,616,902 + BWI76_RS27065 0.19 +1.8 5,616,909 - BWI76_RS27065 0.19 +0.4 5,617,003 + BWI76_RS27065 0.27 +0.6 5,617,140 - BWI76_RS27065 0.38 +0.3 5,617,234 + BWI76_RS27065 0.45 -0.6 5,617,350 + BWI76_RS27065 0.54 -0.0 5,617,506 - BWI76_RS27065 0.67 +0.3 5,617,524 + BWI76_RS27065 0.68 -2.0 5,617,575 - BWI76_RS27065 0.72 -0.2 5,617,696 + BWI76_RS27065 0.82 +0.5 5,617,697 + BWI76_RS27065 0.82 +0.9 5,617,705 - BWI76_RS27065 0.82 +0.0 5,617,763 - BWI76_RS27065 0.87 +2.5 5,617,903 + +0.2 5,617,913 + +0.2 5,617,969 - +0.4 5,618,091 + BWI76_RS27070 0.13 +0.0 5,618,104 - -1.5 5,618,185 + BWI76_RS27070 0.32 +0.5 5,618,224 + BWI76_RS27070 0.40 -0.1 5,618,234 - BWI76_RS27070 0.42 +0.7 5,618,255 + BWI76_RS27070 0.47 +0.5 5,618,413 + BWI76_RS27070 0.79 +0.1 5,618,413 + BWI76_RS27070 0.79 -0.3 5,618,421 - BWI76_RS27070 0.81 -1.0 5,618,423 + BWI76_RS27070 0.81 +0.3 5,618,431 - BWI76_RS27070 0.83 +1.0 5,618,431 - BWI76_RS27070 0.83 -0.2 5,618,431 - BWI76_RS27070 0.83 -0.3 5,618,638 + -0.2 5,618,800 + BWI76_RS27075 0.20 -2.5 5,618,906 - BWI76_RS27075 0.33 -2.8
Or see this region's nucleotide sequence