Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26760 and BWI76_RS26765 are separated by 154 nucleotides BWI76_RS26765 and BWI76_RS26770 are separated by 436 nucleotides
BWI76_RS26760: BWI76_RS26760 - C4-dicarboxylate transport protein DctA <small>(from data)</small>, at 5,542,491 to 5,543,777
_RS26760
BWI76_RS26765: BWI76_RS26765 - phosphodiesterase, at 5,543,932 to 5,545,938
_RS26765
BWI76_RS26770: BWI76_RS26770 - cellulose biosynthesis protein BcsC, at 5,546,375 to 5,549,860
_RS26770
Position (kb) 5543
5544
5545
5546 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5543.274 kb on + strand at 5543.321 kb on - strand, within BWI76_RS26760 at 5543.402 kb on - strand, within BWI76_RS26760 at 5543.446 kb on + strand, within BWI76_RS26760 at 5543.513 kb on + strand, within BWI76_RS26760 at 5543.516 kb on + strand, within BWI76_RS26760 at 5543.554 kb on - strand, within BWI76_RS26760 at 5543.616 kb on + strand, within BWI76_RS26760 at 5543.648 kb on + strand, within BWI76_RS26760 at 5543.672 kb on - strand at 5543.738 kb on - strand at 5543.753 kb on + strand at 5543.851 kb on - strand at 5544.009 kb on - strand at 5544.114 kb on + strand at 5544.122 kb on - strand at 5544.230 kb on - strand, within BWI76_RS26765 at 5544.235 kb on - strand, within BWI76_RS26765 at 5544.240 kb on - strand, within BWI76_RS26765 at 5544.614 kb on - strand, within BWI76_RS26765 at 5544.636 kb on - strand, within BWI76_RS26765 at 5544.735 kb on + strand, within BWI76_RS26765 at 5544.743 kb on - strand, within BWI76_RS26765 at 5544.801 kb on + strand, within BWI76_RS26765 at 5544.879 kb on - strand, within BWI76_RS26765 at 5544.881 kb on - strand, within BWI76_RS26765 at 5545.043 kb on + strand, within BWI76_RS26765 at 5545.096 kb on - strand, within BWI76_RS26765 at 5545.171 kb on + strand, within BWI76_RS26765 at 5545.223 kb on - strand, within BWI76_RS26765 at 5545.562 kb on - strand, within BWI76_RS26765 at 5545.675 kb on + strand, within BWI76_RS26765 at 5545.735 kb on - strand, within BWI76_RS26765 at 5545.735 kb on - strand, within BWI76_RS26765 at 5545.756 kb on - strand at 5545.795 kb on + strand at 5545.859 kb on - strand at 5545.859 kb on - strand at 5546.102 kb on + strand at 5546.483 kb on - strand at 5546.592 kb on + strand at 5546.613 kb on + strand at 5546.661 kb on + strand at 5546.669 kb on - strand at 5546.746 kb on - strand, within BWI76_RS26770 at 5546.757 kb on + strand, within BWI76_RS26770 at 5546.802 kb on - strand, within BWI76_RS26770 at 5546.802 kb on - strand, within BWI76_RS26770 at 5546.802 kb on - strand, within BWI76_RS26770
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,543,274 + -0.8 5,543,321 - BWI76_RS26760 0.64 -1.1 5,543,402 - BWI76_RS26760 0.71 -1.1 5,543,446 + BWI76_RS26760 0.74 -1.7 5,543,513 + BWI76_RS26760 0.79 +0.0 5,543,516 + BWI76_RS26760 0.80 -0.4 5,543,554 - BWI76_RS26760 0.83 -1.1 5,543,616 + BWI76_RS26760 0.87 -0.8 5,543,648 + BWI76_RS26760 0.90 -1.4 5,543,672 - -1.1 5,543,738 - -1.2 5,543,753 + +0.1 5,543,851 - -1.4 5,544,009 - +2.2 5,544,114 + +2.7 5,544,122 - +0.5 5,544,230 - BWI76_RS26765 0.15 +0.6 5,544,235 - BWI76_RS26765 0.15 +0.4 5,544,240 - BWI76_RS26765 0.15 +3.3 5,544,614 - BWI76_RS26765 0.34 +0.3 5,544,636 - BWI76_RS26765 0.35 +0.9 5,544,735 + BWI76_RS26765 0.40 +1.3 5,544,743 - BWI76_RS26765 0.40 +0.3 5,544,801 + BWI76_RS26765 0.43 +0.6 5,544,879 - BWI76_RS26765 0.47 +1.9 5,544,881 - BWI76_RS26765 0.47 +0.8 5,545,043 + BWI76_RS26765 0.55 +1.7 5,545,096 - BWI76_RS26765 0.58 +0.7 5,545,171 + BWI76_RS26765 0.62 +1.1 5,545,223 - BWI76_RS26765 0.64 +1.5 5,545,562 - BWI76_RS26765 0.81 +1.7 5,545,675 + BWI76_RS26765 0.87 +1.6 5,545,735 - BWI76_RS26765 0.90 +1.3 5,545,735 - BWI76_RS26765 0.90 +1.9 5,545,756 - +1.2 5,545,795 + +0.1 5,545,859 - +0.7 5,545,859 - +1.5 5,546,102 + +0.6 5,546,483 - -0.2 5,546,592 + -0.5 5,546,613 + +2.1 5,546,661 + +0.7 5,546,669 - +2.2 5,546,746 - BWI76_RS26770 0.11 +1.2 5,546,757 + BWI76_RS26770 0.11 +1.8 5,546,802 - BWI76_RS26770 0.12 -2.0 5,546,802 - BWI76_RS26770 0.12 -1.3 5,546,802 - BWI76_RS26770 0.12 -2.1
Or see this region's nucleotide sequence