Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25470 and BWI76_RS25475 are separated by 88 nucleotides BWI76_RS25475 and BWI76_RS25480 are separated by 78 nucleotides
BWI76_RS25470: BWI76_RS25470 - metalloprotease TldD, at 5,291,488 to 5,292,933
_RS25470
BWI76_RS25475: BWI76_RS25475 - TIGR02099 family protein, at 5,293,022 to 5,296,819
_RS25475
BWI76_RS25480: BWI76_RS25480 - ribonuclease E/G, at 5,296,898 to 5,298,367
_RS25480
Position (kb) 5293
5294
5295
5296
5297 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 5292.057 kb on + strand, within BWI76_RS25470 at 5292.057 kb on + strand, within BWI76_RS25470 at 5292.065 kb on - strand, within BWI76_RS25470 at 5292.065 kb on - strand, within BWI76_RS25470 at 5292.159 kb on + strand, within BWI76_RS25470 at 5292.159 kb on + strand, within BWI76_RS25470 at 5292.511 kb on - strand, within BWI76_RS25470 at 5292.612 kb on - strand, within BWI76_RS25470 at 5292.671 kb on - strand, within BWI76_RS25470 at 5293.227 kb on + strand at 5293.272 kb on - strand at 5293.291 kb on + strand at 5293.434 kb on - strand, within BWI76_RS25475 at 5293.557 kb on - strand, within BWI76_RS25475 at 5293.562 kb on - strand, within BWI76_RS25475 at 5294.015 kb on - strand, within BWI76_RS25475 at 5294.151 kb on + strand, within BWI76_RS25475 at 5294.159 kb on - strand, within BWI76_RS25475 at 5294.159 kb on - strand, within BWI76_RS25475 at 5294.161 kb on + strand, within BWI76_RS25475 at 5294.213 kb on - strand, within BWI76_RS25475 at 5294.235 kb on + strand at 5294.235 kb on + strand, within BWI76_RS25475 at 5294.264 kb on + strand, within BWI76_RS25475 at 5294.272 kb on - strand, within BWI76_RS25475 at 5294.343 kb on - strand, within BWI76_RS25475 at 5294.361 kb on + strand, within BWI76_RS25475 at 5294.362 kb on - strand, within BWI76_RS25475 at 5294.728 kb on + strand, within BWI76_RS25475 at 5294.732 kb on + strand, within BWI76_RS25475 at 5295.162 kb on - strand, within BWI76_RS25475 at 5295.363 kb on - strand, within BWI76_RS25475 at 5295.397 kb on + strand, within BWI76_RS25475 at 5295.432 kb on - strand, within BWI76_RS25475 at 5295.599 kb on - strand, within BWI76_RS25475 at 5295.610 kb on + strand, within BWI76_RS25475 at 5295.784 kb on + strand, within BWI76_RS25475 at 5295.784 kb on + strand, within BWI76_RS25475 at 5296.213 kb on + strand, within BWI76_RS25475 at 5296.223 kb on + strand, within BWI76_RS25475 at 5296.386 kb on - strand, within BWI76_RS25475 at 5296.386 kb on - strand, within BWI76_RS25475 at 5296.425 kb on + strand, within BWI76_RS25475 at 5296.860 kb on - strand at 5297.232 kb on - strand, within BWI76_RS25480 at 5297.312 kb on + strand, within BWI76_RS25480 at 5297.525 kb on - strand, within BWI76_RS25480 at 5297.591 kb on - strand, within BWI76_RS25480 at 5297.593 kb on + strand, within BWI76_RS25480 at 5297.654 kb on + strand, within BWI76_RS25480
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,292,057 + BWI76_RS25470 0.39 +0.0 5,292,057 + BWI76_RS25470 0.39 -0.4 5,292,065 - BWI76_RS25470 0.40 +0.2 5,292,065 - BWI76_RS25470 0.40 -0.5 5,292,159 + BWI76_RS25470 0.46 -0.0 5,292,159 + BWI76_RS25470 0.46 +0.2 5,292,511 - BWI76_RS25470 0.71 -0.4 5,292,612 - BWI76_RS25470 0.78 +1.2 5,292,671 - BWI76_RS25470 0.82 -1.2 5,293,227 + -4.0 5,293,272 - -3.2 5,293,291 + -2.7 5,293,434 - BWI76_RS25475 0.11 -2.6 5,293,557 - BWI76_RS25475 0.14 -3.7 5,293,562 - BWI76_RS25475 0.14 -2.2 5,294,015 - BWI76_RS25475 0.26 -1.3 5,294,151 + BWI76_RS25475 0.30 -3.1 5,294,159 - BWI76_RS25475 0.30 -1.6 5,294,159 - BWI76_RS25475 0.30 -4.0 5,294,161 + BWI76_RS25475 0.30 -3.3 5,294,213 - BWI76_RS25475 0.31 -3.2 5,294,235 + +0.4 5,294,235 + BWI76_RS25475 0.32 -3.6 5,294,264 + BWI76_RS25475 0.33 -3.8 5,294,272 - BWI76_RS25475 0.33 -3.1 5,294,343 - BWI76_RS25475 0.35 -4.6 5,294,361 + BWI76_RS25475 0.35 -3.6 5,294,362 - BWI76_RS25475 0.35 -4.0 5,294,728 + BWI76_RS25475 0.45 -1.0 5,294,732 + BWI76_RS25475 0.45 -1.4 5,295,162 - BWI76_RS25475 0.56 -2.3 5,295,363 - BWI76_RS25475 0.62 -1.6 5,295,397 + BWI76_RS25475 0.63 -2.5 5,295,432 - BWI76_RS25475 0.63 -2.3 5,295,599 - BWI76_RS25475 0.68 -4.0 5,295,610 + BWI76_RS25475 0.68 -3.0 5,295,784 + BWI76_RS25475 0.73 -4.6 5,295,784 + BWI76_RS25475 0.73 -3.1 5,296,213 + BWI76_RS25475 0.84 -3.7 5,296,223 + BWI76_RS25475 0.84 -4.6 5,296,386 - BWI76_RS25475 0.89 -4.8 5,296,386 - BWI76_RS25475 0.89 -2.4 5,296,425 + BWI76_RS25475 0.90 -3.7 5,296,860 - -0.8 5,297,232 - BWI76_RS25480 0.23 +0.4 5,297,312 + BWI76_RS25480 0.28 +0.4 5,297,525 - BWI76_RS25480 0.43 -1.5 5,297,591 - BWI76_RS25480 0.47 +0.2 5,297,593 + BWI76_RS25480 0.47 -0.2 5,297,654 + BWI76_RS25480 0.51 -1.5
Or see this region's nucleotide sequence