Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24605 and BWI76_RS24610 are separated by 66 nucleotides BWI76_RS24610 and BWI76_RS24615 are separated by 280 nucleotides
BWI76_RS24605: BWI76_RS24605 - dihydroxyacetone kinase subunit DhaM, at 5,128,130 to 5,129,551
_RS24605
BWI76_RS24610: BWI76_RS24610 - dihydroxyacetone kinase, at 5,129,618 to 5,131,267
_RS24610
BWI76_RS24615: BWI76_RS24615 - siderophore-interacting protein, at 5,131,548 to 5,132,321
_RS24615
Position (kb) 5129
5130
5131
5132 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5128.650 kb on + strand, within BWI76_RS24605 at 5128.676 kb on + strand, within BWI76_RS24605 at 5128.773 kb on + strand, within BWI76_RS24605 at 5128.773 kb on + strand, within BWI76_RS24605 at 5128.781 kb on - strand, within BWI76_RS24605 at 5128.918 kb on + strand, within BWI76_RS24605 at 5128.931 kb on - strand, within BWI76_RS24605 at 5129.094 kb on - strand, within BWI76_RS24605 at 5129.143 kb on - strand, within BWI76_RS24605 at 5129.226 kb on + strand, within BWI76_RS24605 at 5129.280 kb on + strand, within BWI76_RS24605 at 5129.295 kb on + strand, within BWI76_RS24605 at 5129.311 kb on + strand, within BWI76_RS24605 at 5129.321 kb on + strand, within BWI76_RS24605 at 5129.391 kb on - strand, within BWI76_RS24605 at 5129.391 kb on - strand, within BWI76_RS24605 at 5129.391 kb on - strand, within BWI76_RS24605 at 5129.405 kb on - strand, within BWI76_RS24605 at 5129.507 kb on + strand at 5129.577 kb on - strand at 5129.710 kb on + strand at 5130.313 kb on - strand, within BWI76_RS24610 at 5130.313 kb on - strand, within BWI76_RS24610 at 5130.313 kb on - strand, within BWI76_RS24610 at 5130.313 kb on - strand, within BWI76_RS24610 at 5130.346 kb on + strand, within BWI76_RS24610 at 5130.574 kb on - strand, within BWI76_RS24610 at 5130.611 kb on - strand, within BWI76_RS24610 at 5130.874 kb on + strand, within BWI76_RS24610 at 5131.315 kb on + strand at 5131.714 kb on + strand, within BWI76_RS24615 at 5131.715 kb on + strand, within BWI76_RS24615 at 5131.716 kb on + strand, within BWI76_RS24615 at 5131.722 kb on - strand, within BWI76_RS24615 at 5131.722 kb on - strand at 5131.727 kb on - strand, within BWI76_RS24615 at 5131.806 kb on + strand, within BWI76_RS24615 at 5131.887 kb on - strand, within BWI76_RS24615 at 5132.048 kb on - strand, within BWI76_RS24615 at 5132.058 kb on - strand, within BWI76_RS24615 at 5132.215 kb on - strand, within BWI76_RS24615
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,128,650 + BWI76_RS24605 0.37 -1.0 5,128,676 + BWI76_RS24605 0.38 -0.8 5,128,773 + BWI76_RS24605 0.45 -0.1 5,128,773 + BWI76_RS24605 0.45 -0.8 5,128,781 - BWI76_RS24605 0.46 -2.6 5,128,918 + BWI76_RS24605 0.55 -1.0 5,128,931 - BWI76_RS24605 0.56 -0.7 5,129,094 - BWI76_RS24605 0.68 -3.1 5,129,143 - BWI76_RS24605 0.71 -1.6 5,129,226 + BWI76_RS24605 0.77 -0.6 5,129,280 + BWI76_RS24605 0.81 -0.8 5,129,295 + BWI76_RS24605 0.82 +2.1 5,129,311 + BWI76_RS24605 0.83 -1.4 5,129,321 + BWI76_RS24605 0.84 -1.3 5,129,391 - BWI76_RS24605 0.89 -1.5 5,129,391 - BWI76_RS24605 0.89 -1.0 5,129,391 - BWI76_RS24605 0.89 -1.0 5,129,405 - BWI76_RS24605 0.90 -1.5 5,129,507 + -0.7 5,129,577 - +0.5 5,129,710 + +0.9 5,130,313 - BWI76_RS24610 0.42 +0.7 5,130,313 - BWI76_RS24610 0.42 +2.5 5,130,313 - BWI76_RS24610 0.42 +0.7 5,130,313 - BWI76_RS24610 0.42 +0.5 5,130,346 + BWI76_RS24610 0.44 -0.6 5,130,574 - BWI76_RS24610 0.58 +0.9 5,130,611 - BWI76_RS24610 0.60 +1.1 5,130,874 + BWI76_RS24610 0.76 -1.2 5,131,315 + +0.3 5,131,714 + BWI76_RS24615 0.21 +0.6 5,131,715 + BWI76_RS24615 0.22 -0.2 5,131,716 + BWI76_RS24615 0.22 -2.1 5,131,722 - BWI76_RS24615 0.22 -0.3 5,131,722 - +1.4 5,131,727 - BWI76_RS24615 0.23 +0.2 5,131,806 + BWI76_RS24615 0.33 +0.2 5,131,887 - BWI76_RS24615 0.44 -0.8 5,132,048 - BWI76_RS24615 0.65 +0.1 5,132,058 - BWI76_RS24615 0.66 +0.4 5,132,215 - BWI76_RS24615 0.86 +0.2
Or see this region's nucleotide sequence