Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24460

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS24455 and BWI76_RS24460 are separated by 58 nucleotidesBWI76_RS24460 and BWI76_RS24465 are separated by 23 nucleotides BWI76_RS24455: BWI76_RS24455 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase, at 5,097,884 to 5,099,317 _RS24455 BWI76_RS24460: BWI76_RS24460 - bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase, at 5,099,376 to 5,102,210 _RS24460 BWI76_RS24465: BWI76_RS24465 - adenylate cyclase, at 5,102,234 to 5,103,532 _RS24465 Position (kb) 5099 5100 5101 5102 5103Strain fitness (log2 ratio) -3 -2 -1 0 1at 5099.498 kb on - strandat 5099.550 kb on - strandat 5099.550 kb on - strandat 5099.627 kb on - strandat 5099.872 kb on + strand, within BWI76_RS24460at 5100.118 kb on + strand, within BWI76_RS24460at 5100.281 kb on - strand, within BWI76_RS24460at 5100.584 kb on + strand, within BWI76_RS24460at 5100.735 kb on - strand, within BWI76_RS24460at 5101.134 kb on + strand, within BWI76_RS24460at 5101.472 kb on - strand, within BWI76_RS24460at 5101.566 kb on + strand, within BWI76_RS24460at 5101.612 kb on - strand, within BWI76_RS24460at 5101.815 kb on - strand, within BWI76_RS24460at 5101.862 kb on + strand, within BWI76_RS24460at 5101.862 kb on + strand, within BWI76_RS24460at 5101.862 kb on + strand, within BWI76_RS24460at 5101.870 kb on - strand, within BWI76_RS24460at 5101.870 kb on - strand, within BWI76_RS24460at 5101.870 kb on - strand, within BWI76_RS24460at 5102.171 kb on - strandat 5102.330 kb on + strandat 5102.359 kb on + strandat 5102.444 kb on - strand, within BWI76_RS24465at 5102.514 kb on + strand, within BWI76_RS24465at 5102.925 kb on + strand, within BWI76_RS24465at 5102.996 kb on - strand, within BWI76_RS24465at 5103.013 kb on + strand, within BWI76_RS24465at 5103.021 kb on - strand, within BWI76_RS24465

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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5,099,498 - -0.4
5,099,550 - -1.0
5,099,550 - -0.2
5,099,627 - -0.8
5,099,872 + BWI76_RS24460 0.17 +0.7
5,100,118 + BWI76_RS24460 0.26 -1.6
5,100,281 - BWI76_RS24460 0.32 -1.8
5,100,584 + BWI76_RS24460 0.43 -0.3
5,100,735 - BWI76_RS24460 0.48 -3.6
5,101,134 + BWI76_RS24460 0.62 +0.4
5,101,472 - BWI76_RS24460 0.74 -1.0
5,101,566 + BWI76_RS24460 0.77 -0.5
5,101,612 - BWI76_RS24460 0.79 -0.2
5,101,815 - BWI76_RS24460 0.86 -1.2
5,101,862 + BWI76_RS24460 0.88 -0.3
5,101,862 + BWI76_RS24460 0.88 -1.7
5,101,862 + BWI76_RS24460 0.88 +0.4
5,101,870 - BWI76_RS24460 0.88 -1.1
5,101,870 - BWI76_RS24460 0.88 +1.2
5,101,870 - BWI76_RS24460 0.88 -0.7
5,102,171 - -0.9
5,102,330 + -0.5
5,102,359 + -2.2
5,102,444 - BWI76_RS24465 0.16 -2.8
5,102,514 + BWI76_RS24465 0.22 -1.0
5,102,925 + BWI76_RS24465 0.53 -0.5
5,102,996 - BWI76_RS24465 0.59 -1.3
5,103,013 + BWI76_RS24465 0.60 -1.7
5,103,021 - BWI76_RS24465 0.61 -0.8

Or see this region's nucleotide sequence