Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19510

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19505 and BWI76_RS19510 are separated by 167 nucleotidesBWI76_RS19510 and BWI76_RS19515 are separated by 194 nucleotides BWI76_RS19505: BWI76_RS19505 - ABC transporter substrate-binding protein, at 4,075,188 to 4,076,105 _RS19505 BWI76_RS19510: BWI76_RS19510 - beta-glucosidase, at 4,076,273 to 4,078,570 _RS19510 BWI76_RS19515: BWI76_RS19515 - D-lactate dehydrogenase (cytochrome c-553) (EC 1.1.2.5) (from data), at 4,078,765 to 4,080,507 _RS19515 Position (kb) 4076 4077 4078 4079Strain fitness (log2 ratio) -1 0 1at 4075.369 kb on - strand, within BWI76_RS19505at 4075.594 kb on - strand, within BWI76_RS19505at 4075.622 kb on + strand, within BWI76_RS19505at 4075.714 kb on + strand, within BWI76_RS19505at 4075.907 kb on + strand, within BWI76_RS19505at 4075.915 kb on - strand, within BWI76_RS19505at 4075.957 kb on - strand, within BWI76_RS19505at 4076.428 kb on + strandat 4076.614 kb on + strand, within BWI76_RS19510at 4076.669 kb on - strand, within BWI76_RS19510at 4076.679 kb on - strand, within BWI76_RS19510at 4076.735 kb on - strand, within BWI76_RS19510at 4076.756 kb on - strand, within BWI76_RS19510at 4076.966 kb on + strand, within BWI76_RS19510at 4077.582 kb on - strand, within BWI76_RS19510at 4077.584 kb on + strandat 4077.756 kb on + strand, within BWI76_RS19510at 4077.902 kb on + strand, within BWI76_RS19510at 4077.954 kb on - strand, within BWI76_RS19510at 4077.990 kb on - strand, within BWI76_RS19510at 4078.195 kb on + strand, within BWI76_RS19510at 4078.289 kb on + strand, within BWI76_RS19510at 4078.348 kb on - strandat 4078.804 kb on + strandat 4078.893 kb on - strandat 4078.934 kb on - strandat 4079.032 kb on + strand, within BWI76_RS19515at 4079.114 kb on - strand, within BWI76_RS19515

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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4,075,369 - BWI76_RS19505 0.20 +0.7
4,075,594 - BWI76_RS19505 0.44 -0.5
4,075,622 + BWI76_RS19505 0.47 +0.5
4,075,714 + BWI76_RS19505 0.57 +0.4
4,075,907 + BWI76_RS19505 0.78 -0.7
4,075,915 - BWI76_RS19505 0.79 -0.0
4,075,957 - BWI76_RS19505 0.84 -1.3
4,076,428 + +0.2
4,076,614 + BWI76_RS19510 0.15 +1.3
4,076,669 - BWI76_RS19510 0.17 +0.2
4,076,679 - BWI76_RS19510 0.18 +0.9
4,076,735 - BWI76_RS19510 0.20 -1.3
4,076,756 - BWI76_RS19510 0.21 +0.1
4,076,966 + BWI76_RS19510 0.30 +1.1
4,077,582 - BWI76_RS19510 0.57 +1.6
4,077,584 + +0.9
4,077,756 + BWI76_RS19510 0.65 +0.4
4,077,902 + BWI76_RS19510 0.71 +0.0
4,077,954 - BWI76_RS19510 0.73 +0.7
4,077,990 - BWI76_RS19510 0.75 +1.1
4,078,195 + BWI76_RS19510 0.84 +0.4
4,078,289 + BWI76_RS19510 0.88 +0.0
4,078,348 - +1.3
4,078,804 + -0.1
4,078,893 - +0.9
4,078,934 - +0.1
4,079,032 + BWI76_RS19515 0.15 -0.3
4,079,114 - BWI76_RS19515 0.20 +1.1

Or see this region's nucleotide sequence