Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19505 and BWI76_RS19510 are separated by 167 nucleotides BWI76_RS19510 and BWI76_RS19515 are separated by 194 nucleotides
BWI76_RS19505: BWI76_RS19505 - ABC transporter substrate-binding protein, at 4,075,188 to 4,076,105
_RS19505
BWI76_RS19510: BWI76_RS19510 - beta-glucosidase, at 4,076,273 to 4,078,570
_RS19510
BWI76_RS19515: BWI76_RS19515 - D-lactate dehydrogenase (cytochrome c-553) (EC 1.1.2.5) (from data) , at 4,078,765 to 4,080,507
_RS19515
Position (kb)
4076
4077
4078
4079 Strain fitness (log2 ratio)
-1
0
1 at 4075.369 kb on - strand, within BWI76_RS19505 at 4075.594 kb on - strand, within BWI76_RS19505 at 4075.622 kb on + strand, within BWI76_RS19505 at 4075.714 kb on + strand, within BWI76_RS19505 at 4075.907 kb on + strand, within BWI76_RS19505 at 4075.915 kb on - strand, within BWI76_RS19505 at 4075.957 kb on - strand, within BWI76_RS19505 at 4076.428 kb on + strand at 4076.614 kb on + strand, within BWI76_RS19510 at 4076.669 kb on - strand, within BWI76_RS19510 at 4076.679 kb on - strand, within BWI76_RS19510 at 4076.735 kb on - strand, within BWI76_RS19510 at 4076.756 kb on - strand, within BWI76_RS19510 at 4076.966 kb on + strand, within BWI76_RS19510 at 4077.582 kb on - strand, within BWI76_RS19510 at 4077.584 kb on + strand at 4077.756 kb on + strand, within BWI76_RS19510 at 4077.902 kb on + strand, within BWI76_RS19510 at 4077.954 kb on - strand, within BWI76_RS19510 at 4077.990 kb on - strand, within BWI76_RS19510 at 4078.195 kb on + strand, within BWI76_RS19510 at 4078.289 kb on + strand, within BWI76_RS19510 at 4078.348 kb on - strand at 4078.804 kb on + strand at 4078.893 kb on - strand at 4078.934 kb on - strand at 4079.032 kb on + strand, within BWI76_RS19515 at 4079.114 kb on - strand, within BWI76_RS19515
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 4,075,369 - BWI76_RS19505 0.20 +0.7 4,075,594 - BWI76_RS19505 0.44 -0.5 4,075,622 + BWI76_RS19505 0.47 +0.5 4,075,714 + BWI76_RS19505 0.57 +0.4 4,075,907 + BWI76_RS19505 0.78 -0.7 4,075,915 - BWI76_RS19505 0.79 -0.0 4,075,957 - BWI76_RS19505 0.84 -1.3 4,076,428 + +0.2 4,076,614 + BWI76_RS19510 0.15 +1.3 4,076,669 - BWI76_RS19510 0.17 +0.2 4,076,679 - BWI76_RS19510 0.18 +0.9 4,076,735 - BWI76_RS19510 0.20 -1.3 4,076,756 - BWI76_RS19510 0.21 +0.1 4,076,966 + BWI76_RS19510 0.30 +1.1 4,077,582 - BWI76_RS19510 0.57 +1.6 4,077,584 + +0.9 4,077,756 + BWI76_RS19510 0.65 +0.4 4,077,902 + BWI76_RS19510 0.71 +0.0 4,077,954 - BWI76_RS19510 0.73 +0.7 4,077,990 - BWI76_RS19510 0.75 +1.1 4,078,195 + BWI76_RS19510 0.84 +0.4 4,078,289 + BWI76_RS19510 0.88 +0.0 4,078,348 - +1.3 4,078,804 + -0.1 4,078,893 - +0.9 4,078,934 - +0.1 4,079,032 + BWI76_RS19515 0.15 -0.3 4,079,114 - BWI76_RS19515 0.20 +1.1
Or see this region's nucleotide sequence