Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18350 and BWI76_RS18355 overlap by 4 nucleotides BWI76_RS18355 and BWI76_RS18360 are separated by 15 nucleotides BWI76_RS18360 and BWI76_RS18365 are separated by 95 nucleotides
BWI76_RS18350: BWI76_RS18350 - L-cystine ABC transporter ATP-binding protein YecC, at 3,809,827 to 3,810,579
_RS18350
BWI76_RS18355: BWI76_RS18355 - amino acid ABC transporter permease, at 3,810,576 to 3,811,244
_RS18355
BWI76_RS18360: BWI76_RS18360 - aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein, at 3,811,260 to 3,812,246
_RS18360
BWI76_RS18365: BWI76_RS18365 - cystine ABC transporter substrate-binding protein, at 3,812,342 to 3,813,142
_RS18365
Position (kb)
3811
3812
3813 Strain fitness (log2 ratio)
-1
0
1 at 3810.276 kb on + strand, within BWI76_RS18350 at 3810.324 kb on - strand, within BWI76_RS18350 at 3810.357 kb on + strand, within BWI76_RS18350 at 3810.365 kb on - strand, within BWI76_RS18350 at 3810.437 kb on - strand, within BWI76_RS18350 at 3810.518 kb on - strand at 3810.600 kb on + strand at 3810.724 kb on + strand, within BWI76_RS18355 at 3810.737 kb on - strand, within BWI76_RS18355 at 3811.005 kb on - strand, within BWI76_RS18355 at 3811.173 kb on - strand, within BWI76_RS18355 at 3811.226 kb on + strand at 3811.234 kb on - strand at 3811.286 kb on + strand at 3811.486 kb on + strand, within BWI76_RS18360 at 3811.800 kb on - strand, within BWI76_RS18360 at 3811.968 kb on - strand, within BWI76_RS18360 at 3812.259 kb on - strand at 3812.430 kb on + strand, within BWI76_RS18365 at 3812.451 kb on + strand, within BWI76_RS18365 at 3812.451 kb on + strand, within BWI76_RS18365 at 3812.459 kb on - strand, within BWI76_RS18365 at 3812.777 kb on - strand, within BWI76_RS18365 at 3812.997 kb on - strand, within BWI76_RS18365 at 3813.035 kb on - strand, within BWI76_RS18365 at 3813.130 kb on - strand at 3813.183 kb on - strand at 3813.184 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 3,810,276 + BWI76_RS18350 0.60 -1.1 3,810,324 - BWI76_RS18350 0.66 -0.0 3,810,357 + BWI76_RS18350 0.70 +0.3 3,810,365 - BWI76_RS18350 0.71 -1.0 3,810,437 - BWI76_RS18350 0.81 -0.2 3,810,518 - -0.1 3,810,600 + +0.4 3,810,724 + BWI76_RS18355 0.22 -1.4 3,810,737 - BWI76_RS18355 0.24 -0.3 3,811,005 - BWI76_RS18355 0.64 -0.7 3,811,173 - BWI76_RS18355 0.89 +0.1 3,811,226 + -1.2 3,811,234 - +0.7 3,811,286 + -0.2 3,811,486 + BWI76_RS18360 0.23 +0.8 3,811,800 - BWI76_RS18360 0.55 +0.7 3,811,968 - BWI76_RS18360 0.72 +1.0 3,812,259 - +0.1 3,812,430 + BWI76_RS18365 0.11 -0.1 3,812,451 + BWI76_RS18365 0.14 -0.1 3,812,451 + BWI76_RS18365 0.14 +0.0 3,812,459 - BWI76_RS18365 0.15 +1.2 3,812,777 - BWI76_RS18365 0.54 +0.3 3,812,997 - BWI76_RS18365 0.82 +0.5 3,813,035 - BWI76_RS18365 0.87 +0.2 3,813,130 - -0.1 3,813,183 - +0.5 3,813,184 + +0.7
Or see this region's nucleotide sequence