Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18295 and BWI76_RS18300 are separated by 30 nucleotides BWI76_RS18300 and BWI76_RS18305 are separated by 66 nucleotides BWI76_RS18305 and BWI76_RS18310 are separated by 190 nucleotides BWI76_RS18310 and BWI76_RS18315 are separated by 13 nucleotides BWI76_RS18315 and BWI76_RS18320 are separated by 38 nucleotides BWI76_RS18320 and BWI76_RS18325 are separated by 151 nucleotides
BWI76_RS18295: BWI76_RS18295 - tyrosine transporter TyrP, at 3,801,476 to 3,802,687
_RS18295
BWI76_RS18300: BWI76_RS18300 - hypothetical protein, at 3,802,718 to 3,803,386
_RS18300
BWI76_RS18305: BWI76_RS18305 - dihydrodipicolinate synthase family protein, at 3,803,453 to 3,804,340
_RS18305
BWI76_RS18310: BWI76_RS18310 - tRNA-Leu, at 3,804,531 to 3,804,617
_RS18310
BWI76_RS18315: BWI76_RS18315 - tRNA-Cys, at 3,804,631 to 3,804,704
_RS18315
BWI76_RS18320: BWI76_RS18320 - tRNA-Gly, at 3,804,743 to 3,804,818
_RS18320
BWI76_RS18325: BWI76_RS18325 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 3,804,970 to 3,805,518
_RS18325
Position (kb)
3803
3804
3805 Strain fitness (log2 ratio)
-1
0
1 at 3802.481 kb on + strand, within BWI76_RS18295 at 3802.672 kb on - strand at 3802.788 kb on - strand, within BWI76_RS18300 at 3802.839 kb on + strand, within BWI76_RS18300 at 3803.016 kb on - strand, within BWI76_RS18300 at 3803.249 kb on - strand, within BWI76_RS18300 at 3803.975 kb on - strand, within BWI76_RS18305 at 3804.128 kb on + strand, within BWI76_RS18305
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 3,802,481 + BWI76_RS18295 0.83 +0.3 3,802,672 - -0.2 3,802,788 - BWI76_RS18300 0.10 +1.2 3,802,839 + BWI76_RS18300 0.18 -0.8 3,803,016 - BWI76_RS18300 0.45 -0.0 3,803,249 - BWI76_RS18300 0.79 -0.1 3,803,975 - BWI76_RS18305 0.59 +0.4 3,804,128 + BWI76_RS18305 0.76 -0.1
Or see this region's nucleotide sequence