Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18105

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS18100 and BWI76_RS18105 are separated by 220 nucleotidesBWI76_RS18105 and BWI76_RS18110 are separated by 355 nucleotides BWI76_RS18100: BWI76_RS18100 - phosphogluconate dehydratase, at 3,759,855 to 3,761,666 _RS18100 BWI76_RS18105: BWI76_RS18105 - glucose-6-phosphate dehydrogenase, at 3,761,887 to 3,763,362 _RS18105 BWI76_RS18110: BWI76_RS18110 - transcriptional regulator HexR, at 3,763,718 to 3,764,587 _RS18110 Position (kb) 3761 3762 3763 3764Strain fitness (log2 ratio) -2 -1 0 1at 3761.210 kb on + strand, within BWI76_RS18100at 3761.210 kb on + strand, within BWI76_RS18100at 3761.210 kb on + strand, within BWI76_RS18100at 3761.210 kb on + strand, within BWI76_RS18100at 3761.374 kb on + strand, within BWI76_RS18100at 3761.379 kb on + strand, within BWI76_RS18100at 3761.387 kb on - strand, within BWI76_RS18100at 3761.572 kb on + strandat 3761.572 kb on + strandat 3763.428 kb on + strandat 3763.501 kb on - strandat 3763.519 kb on - strandat 3763.874 kb on - strand, within BWI76_RS18110at 3764.089 kb on + strand, within BWI76_RS18110at 3764.255 kb on - strand, within BWI76_RS18110

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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3,761,210 + BWI76_RS18100 0.75 +0.3
3,761,210 + BWI76_RS18100 0.75 +0.5
3,761,210 + BWI76_RS18100 0.75 +0.2
3,761,210 + BWI76_RS18100 0.75 -0.9
3,761,374 + BWI76_RS18100 0.84 -0.2
3,761,379 + BWI76_RS18100 0.84 -0.9
3,761,387 - BWI76_RS18100 0.85 -0.0
3,761,572 + -0.8
3,761,572 + -0.1
3,763,428 + -2.0
3,763,501 - -0.3
3,763,519 - +0.3
3,763,874 - BWI76_RS18110 0.18 -0.8
3,764,089 + BWI76_RS18110 0.43 -1.8
3,764,255 - BWI76_RS18110 0.62 -0.5

Or see this region's nucleotide sequence