Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17730

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS17725 and BWI76_RS17730 are separated by 16 nucleotidesBWI76_RS17730 and BWI76_RS17735 are separated by 12 nucleotides BWI76_RS17725: BWI76_RS17725 - K+/H+ antiporter, at 3,684,735 to 3,686,468 _RS17725 BWI76_RS17730: BWI76_RS17730 - alanine racemase, at 3,686,485 to 3,687,555 _RS17730 BWI76_RS17735: BWI76_RS17735 - D-amino acid dehydrogenase small subunit, at 3,687,568 to 3,688,866 _RS17735 Position (kb) 3686 3687 3688Strain fitness (log2 ratio) -1 0 1 2at 3685.485 kb on - strand, within BWI76_RS17725at 3685.714 kb on + strand, within BWI76_RS17725at 3685.722 kb on - strand, within BWI76_RS17725at 3685.752 kb on + strand, within BWI76_RS17725at 3685.856 kb on - strand, within BWI76_RS17725at 3686.125 kb on - strand, within BWI76_RS17725at 3687.476 kb on - strandat 3687.553 kb on + strandat 3688.130 kb on + strand, within BWI76_RS17735at 3688.330 kb on - strand, within BWI76_RS17735at 3688.522 kb on + strand, within BWI76_RS17735

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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3,685,485 - BWI76_RS17725 0.43 -0.5
3,685,714 + BWI76_RS17725 0.56 -0.3
3,685,722 - BWI76_RS17725 0.57 +0.5
3,685,752 + BWI76_RS17725 0.59 +0.1
3,685,856 - BWI76_RS17725 0.65 +0.1
3,686,125 - BWI76_RS17725 0.80 -0.4
3,687,476 - +2.3
3,687,553 + -0.6
3,688,130 + BWI76_RS17735 0.43 -1.2
3,688,330 - BWI76_RS17735 0.59 -1.0
3,688,522 + BWI76_RS17735 0.73 -1.2

Or see this region's nucleotide sequence