Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14895

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14890 and BWI76_RS14895 are separated by 11 nucleotidesBWI76_RS14895 and BWI76_RS14900 are separated by 16 nucleotides BWI76_RS14890: BWI76_RS14890 - carbohydrate kinase, at 3,119,700 to 3,121,238 _RS14890 BWI76_RS14895: BWI76_RS14895 - 3-oxoacyl-ACP reductase, at 3,121,250 to 3,122,011 _RS14895 BWI76_RS14900: BWI76_RS14900 - oxidoreductase, at 3,122,028 to 3,123,023 _RS14900 Position (kb) 3121 3122 3123Strain fitness (log2 ratio) -1 0 1at 3120.394 kb on - strand, within BWI76_RS14890at 3120.643 kb on + strand, within BWI76_RS14890at 3120.859 kb on - strand, within BWI76_RS14890at 3120.909 kb on - strand, within BWI76_RS14890at 3120.912 kb on + strand, within BWI76_RS14890at 3121.380 kb on + strand, within BWI76_RS14895at 3121.380 kb on + strand, within BWI76_RS14895at 3121.533 kb on + strand, within BWI76_RS14895at 3121.586 kb on - strand, within BWI76_RS14895at 3121.691 kb on - strand, within BWI76_RS14895at 3121.810 kb on - strand, within BWI76_RS14895at 3121.821 kb on + strand, within BWI76_RS14895at 3121.976 kb on + strandat 3121.982 kb on + strandat 3122.090 kb on - strandat 3122.188 kb on + strand, within BWI76_RS14900at 3122.196 kb on - strand, within BWI76_RS14900at 3122.348 kb on + strand, within BWI76_RS14900at 3122.640 kb on + strand, within BWI76_RS14900at 3122.681 kb on + strand, within BWI76_RS14900at 3122.810 kb on + strand, within BWI76_RS14900at 3122.818 kb on - strand, within BWI76_RS14900at 3122.873 kb on - strand, within BWI76_RS14900at 3122.883 kb on + strand, within BWI76_RS14900at 3122.891 kb on - strand, within BWI76_RS14900at 3122.927 kb on + strandat 3122.929 kb on - strandat 3122.935 kb on - strandat 3122.940 kb on - strandat 3122.940 kb on - strandat 3122.954 kb on - strandat 3122.964 kb on - strandat 3122.964 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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3,120,394 - BWI76_RS14890 0.45 -0.3
3,120,643 + BWI76_RS14890 0.61 -0.5
3,120,859 - BWI76_RS14890 0.75 +0.5
3,120,909 - BWI76_RS14890 0.79 -1.2
3,120,912 + BWI76_RS14890 0.79 -0.6
3,121,380 + BWI76_RS14895 0.17 +0.1
3,121,380 + BWI76_RS14895 0.17 +0.0
3,121,533 + BWI76_RS14895 0.37 -0.1
3,121,586 - BWI76_RS14895 0.44 +0.0
3,121,691 - BWI76_RS14895 0.58 +0.8
3,121,810 - BWI76_RS14895 0.73 -0.4
3,121,821 + BWI76_RS14895 0.75 -0.2
3,121,976 + -0.1
3,121,982 + +0.2
3,122,090 - +0.6
3,122,188 + BWI76_RS14900 0.16 +0.4
3,122,196 - BWI76_RS14900 0.17 -0.1
3,122,348 + BWI76_RS14900 0.32 +0.1
3,122,640 + BWI76_RS14900 0.61 +0.5
3,122,681 + BWI76_RS14900 0.66 -0.7
3,122,810 + BWI76_RS14900 0.79 +0.7
3,122,818 - BWI76_RS14900 0.79 -0.6
3,122,873 - BWI76_RS14900 0.85 -0.6
3,122,883 + BWI76_RS14900 0.86 +0.0
3,122,891 - BWI76_RS14900 0.87 -1.5
3,122,927 + -0.8
3,122,929 - +1.4
3,122,935 - +0.4
3,122,940 - +0.5
3,122,940 - +0.8
3,122,954 - +1.0
3,122,964 - -0.2
3,122,964 - -0.1

Or see this region's nucleotide sequence