Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14890 and BWI76_RS14895 are separated by 11 nucleotides BWI76_RS14895 and BWI76_RS14900 are separated by 16 nucleotides
BWI76_RS14890: BWI76_RS14890 - carbohydrate kinase, at 3,119,700 to 3,121,238
_RS14890
BWI76_RS14895: BWI76_RS14895 - 3-oxoacyl-ACP reductase, at 3,121,250 to 3,122,011
_RS14895
BWI76_RS14900: BWI76_RS14900 - oxidoreductase, at 3,122,028 to 3,123,023
_RS14900
Position (kb)
3121
3122
3123 Strain fitness (log2 ratio)
-1
0
1 at 3120.394 kb on - strand, within BWI76_RS14890 at 3120.643 kb on + strand, within BWI76_RS14890 at 3120.859 kb on - strand, within BWI76_RS14890 at 3120.909 kb on - strand, within BWI76_RS14890 at 3120.912 kb on + strand, within BWI76_RS14890 at 3121.380 kb on + strand, within BWI76_RS14895 at 3121.380 kb on + strand, within BWI76_RS14895 at 3121.533 kb on + strand, within BWI76_RS14895 at 3121.586 kb on - strand, within BWI76_RS14895 at 3121.691 kb on - strand, within BWI76_RS14895 at 3121.810 kb on - strand, within BWI76_RS14895 at 3121.821 kb on + strand, within BWI76_RS14895 at 3121.976 kb on + strand at 3121.982 kb on + strand at 3122.090 kb on - strand at 3122.188 kb on + strand, within BWI76_RS14900 at 3122.196 kb on - strand, within BWI76_RS14900 at 3122.348 kb on + strand, within BWI76_RS14900 at 3122.640 kb on + strand, within BWI76_RS14900 at 3122.681 kb on + strand, within BWI76_RS14900 at 3122.810 kb on + strand, within BWI76_RS14900 at 3122.818 kb on - strand, within BWI76_RS14900 at 3122.873 kb on - strand, within BWI76_RS14900 at 3122.883 kb on + strand, within BWI76_RS14900 at 3122.891 kb on - strand, within BWI76_RS14900 at 3122.927 kb on + strand at 3122.929 kb on - strand at 3122.935 kb on - strand at 3122.940 kb on - strand at 3122.940 kb on - strand at 3122.954 kb on - strand at 3122.964 kb on - strand at 3122.964 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 3,120,394 - BWI76_RS14890 0.45 -0.3 3,120,643 + BWI76_RS14890 0.61 -0.5 3,120,859 - BWI76_RS14890 0.75 +0.5 3,120,909 - BWI76_RS14890 0.79 -1.2 3,120,912 + BWI76_RS14890 0.79 -0.6 3,121,380 + BWI76_RS14895 0.17 +0.1 3,121,380 + BWI76_RS14895 0.17 +0.0 3,121,533 + BWI76_RS14895 0.37 -0.1 3,121,586 - BWI76_RS14895 0.44 +0.0 3,121,691 - BWI76_RS14895 0.58 +0.8 3,121,810 - BWI76_RS14895 0.73 -0.4 3,121,821 + BWI76_RS14895 0.75 -0.2 3,121,976 + -0.1 3,121,982 + +0.2 3,122,090 - +0.6 3,122,188 + BWI76_RS14900 0.16 +0.4 3,122,196 - BWI76_RS14900 0.17 -0.1 3,122,348 + BWI76_RS14900 0.32 +0.1 3,122,640 + BWI76_RS14900 0.61 +0.5 3,122,681 + BWI76_RS14900 0.66 -0.7 3,122,810 + BWI76_RS14900 0.79 +0.7 3,122,818 - BWI76_RS14900 0.79 -0.6 3,122,873 - BWI76_RS14900 0.85 -0.6 3,122,883 + BWI76_RS14900 0.86 +0.0 3,122,891 - BWI76_RS14900 0.87 -1.5 3,122,927 + -0.8 3,122,929 - +1.4 3,122,935 - +0.4 3,122,940 - +0.5 3,122,940 - +0.8 3,122,954 - +1.0 3,122,964 - -0.2 3,122,964 - -0.1
Or see this region's nucleotide sequence