Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14860

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14855 and BWI76_RS14860 are separated by 66 nucleotidesBWI76_RS14860 and BWI76_RS14865 overlap by 14 nucleotides BWI76_RS14855: BWI76_RS14855 - periplasmic binding protein/LacI transcriptional regulator, at 3,111,702 to 3,112,655 _RS14855 BWI76_RS14860: BWI76_RS14860 - ABC transporter, at 3,112,722 to 3,114,254 _RS14860 BWI76_RS14865: BWI76_RS14865 - ribose ABC transporter permease, at 3,114,241 to 3,115,260 _RS14865 Position (kb) 3112 3113 3114 3115Strain fitness (log2 ratio) -2 -1 0 1at 3111.842 kb on + strand, within BWI76_RS14855at 3111.844 kb on - strand, within BWI76_RS14855at 3111.907 kb on + strand, within BWI76_RS14855at 3111.972 kb on - strand, within BWI76_RS14855at 3112.231 kb on - strand, within BWI76_RS14855at 3112.435 kb on + strand, within BWI76_RS14855at 3112.527 kb on + strand, within BWI76_RS14855at 3112.554 kb on + strand, within BWI76_RS14855at 3112.712 kb on - strandat 3112.743 kb on + strandat 3112.859 kb on + strandat 3112.859 kb on + strandat 3112.962 kb on - strand, within BWI76_RS14860at 3113.005 kb on - strand, within BWI76_RS14860at 3113.052 kb on - strand, within BWI76_RS14860at 3113.297 kb on - strand, within BWI76_RS14860at 3113.344 kb on - strand, within BWI76_RS14860at 3113.551 kb on + strand, within BWI76_RS14860at 3113.602 kb on - strand, within BWI76_RS14860at 3113.870 kb on - strand, within BWI76_RS14860at 3113.915 kb on + strand, within BWI76_RS14860at 3114.106 kb on - strandat 3114.353 kb on + strand, within BWI76_RS14865at 3114.684 kb on - strand, within BWI76_RS14865at 3114.741 kb on + strand, within BWI76_RS14865at 3115.035 kb on - strand, within BWI76_RS14865

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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3,111,842 + BWI76_RS14855 0.15 +0.2
3,111,844 - BWI76_RS14855 0.15 +0.1
3,111,907 + BWI76_RS14855 0.21 +0.4
3,111,972 - BWI76_RS14855 0.28 -0.0
3,112,231 - BWI76_RS14855 0.55 +0.1
3,112,435 + BWI76_RS14855 0.77 +0.3
3,112,527 + BWI76_RS14855 0.86 +0.2
3,112,554 + BWI76_RS14855 0.89 +0.3
3,112,712 - +0.2
3,112,743 + -0.1
3,112,859 + +0.2
3,112,859 + -0.1
3,112,962 - BWI76_RS14860 0.16 +0.4
3,113,005 - BWI76_RS14860 0.18 +0.5
3,113,052 - BWI76_RS14860 0.22 -1.8
3,113,297 - BWI76_RS14860 0.38 -2.1
3,113,344 - BWI76_RS14860 0.41 -0.1
3,113,551 + BWI76_RS14860 0.54 +0.2
3,113,602 - BWI76_RS14860 0.57 +0.0
3,113,870 - BWI76_RS14860 0.75 -0.2
3,113,915 + BWI76_RS14860 0.78 +0.6
3,114,106 - +0.2
3,114,353 + BWI76_RS14865 0.11 +0.3
3,114,684 - BWI76_RS14865 0.43 -0.2
3,114,741 + BWI76_RS14865 0.49 +0.1
3,115,035 - BWI76_RS14865 0.78 +0.4

Or see this region's nucleotide sequence