Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14605

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14600 and BWI76_RS14605 are separated by 9 nucleotidesBWI76_RS14605 and BWI76_RS14610 are separated by 3 nucleotides BWI76_RS14600: BWI76_RS14600 - ABC transporter ATP-binding protein, at 3,064,659 to 3,065,441 _RS14600 BWI76_RS14605: BWI76_RS14605 - ABC transporter permease, at 3,065,451 to 3,066,461 _RS14605 BWI76_RS14610: BWI76_RS14610 - putative hydrolase, at 3,066,465 to 3,067,544 _RS14610 Position (kb) 3065 3066 3067Strain fitness (log2 ratio) -1 0 1at 3064.964 kb on - strand, within BWI76_RS14600at 3065.364 kb on + strandat 3065.539 kb on - strandat 3065.720 kb on + strand, within BWI76_RS14605at 3065.923 kb on - strand, within BWI76_RS14605at 3066.091 kb on - strand, within BWI76_RS14605at 3066.231 kb on - strand, within BWI76_RS14605at 3066.305 kb on + strand, within BWI76_RS14605at 3066.399 kb on - strandat 3066.900 kb on + strand, within BWI76_RS14610at 3067.185 kb on - strand, within BWI76_RS14610at 3067.315 kb on - strand, within BWI76_RS14610

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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3,064,964 - BWI76_RS14600 0.39 +0.6
3,065,364 + -0.2
3,065,539 - +0.6
3,065,720 + BWI76_RS14605 0.27 -0.1
3,065,923 - BWI76_RS14605 0.47 -0.1
3,066,091 - BWI76_RS14605 0.63 -0.2
3,066,231 - BWI76_RS14605 0.77 -0.4
3,066,305 + BWI76_RS14605 0.84 +1.1
3,066,399 - +1.1
3,066,900 + BWI76_RS14610 0.40 +0.0
3,067,185 - BWI76_RS14610 0.67 +0.1
3,067,315 - BWI76_RS14610 0.79 -0.3

Or see this region's nucleotide sequence