Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13080

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13070 and BWI76_RS13075 are separated by 231 nucleotidesBWI76_RS13075 and BWI76_RS13080 are separated by 176 nucleotidesBWI76_RS13080 and BWI76_RS13085 are separated by 190 nucleotides BWI76_RS13070: BWI76_RS13070 - hypothetical protein, at 2,726,041 to 2,726,268 _RS13070 BWI76_RS13075: BWI76_RS13075 - cupin, at 2,726,500 to 2,726,832 _RS13075 BWI76_RS13080: BWI76_RS13080 - tyramine oxidase, at 2,727,009 to 2,729,267 _RS13080 BWI76_RS13085: BWI76_RS13085 - bifunctional oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase, at 2,729,458 to 2,731,503 _RS13085 Position (kb) 2727 2728 2729 2730Strain fitness (log2 ratio) -1 0 1 2at 2726.069 kb on - strand, within BWI76_RS13070at 2726.205 kb on - strand, within BWI76_RS13070at 2727.014 kb on + strandat 2727.138 kb on + strandat 2727.538 kb on + strand, within BWI76_RS13080at 2727.699 kb on - strand, within BWI76_RS13080at 2727.838 kb on + strand, within BWI76_RS13080at 2727.925 kb on - strand, within BWI76_RS13080at 2727.970 kb on + strand, within BWI76_RS13080at 2728.157 kb on - strand, within BWI76_RS13080at 2728.436 kb on + strand, within BWI76_RS13080at 2728.484 kb on + strand, within BWI76_RS13080at 2728.625 kb on + strand, within BWI76_RS13080at 2728.857 kb on - strand, within BWI76_RS13080at 2729.207 kb on - strandat 2729.232 kb on + strandat 2729.240 kb on - strandat 2729.331 kb on + strandat 2729.426 kb on - strandat 2729.426 kb on - strandat 2729.426 kb on - strandat 2729.818 kb on - strand, within BWI76_RS13085at 2729.949 kb on + strand, within BWI76_RS13085at 2729.957 kb on - strand, within BWI76_RS13085at 2730.001 kb on + strand, within BWI76_RS13085at 2730.009 kb on - strand, within BWI76_RS13085

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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2,726,069 - BWI76_RS13070 0.12 +0.1
2,726,205 - BWI76_RS13070 0.72 +0.4
2,727,014 + -0.1
2,727,138 + -0.2
2,727,538 + BWI76_RS13080 0.23 +0.2
2,727,699 - BWI76_RS13080 0.31 +0.1
2,727,838 + BWI76_RS13080 0.37 +1.0
2,727,925 - BWI76_RS13080 0.41 +0.3
2,727,970 + BWI76_RS13080 0.43 +1.8
2,728,157 - BWI76_RS13080 0.51 -1.7
2,728,436 + BWI76_RS13080 0.63 -0.8
2,728,484 + BWI76_RS13080 0.65 +0.2
2,728,625 + BWI76_RS13080 0.72 -0.3
2,728,857 - BWI76_RS13080 0.82 -0.1
2,729,207 - -0.2
2,729,232 + -0.4
2,729,240 - +0.1
2,729,331 + +0.4
2,729,426 - +0.0
2,729,426 - +0.2
2,729,426 - -0.1
2,729,818 - BWI76_RS13085 0.18 +0.7
2,729,949 + BWI76_RS13085 0.24 +0.3
2,729,957 - BWI76_RS13085 0.24 -0.5
2,730,001 + BWI76_RS13085 0.27 -0.2
2,730,009 - BWI76_RS13085 0.27 +0.4

Or see this region's nucleotide sequence