Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12000

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11995 and BWI76_RS12000 are separated by 182 nucleotidesBWI76_RS12000 and BWI76_RS12005 are separated by 210 nucleotidesBWI76_RS12005 and BWI76_RS12010 are separated by 18 nucleotides BWI76_RS11995: BWI76_RS11995 - hypothetical protein, at 2,524,241 to 2,525,398 _RS11995 BWI76_RS12000: BWI76_RS12000 - enoyl-[acyl-carrier-protein] reductase, at 2,525,581 to 2,526,369 _RS12000 BWI76_RS12005: BWI76_RS12005 - hypothetical protein, at 2,526,580 to 2,527,122 _RS12005 BWI76_RS12010: BWI76_RS12010 - antimicrobial peptide ABC system ATP-binding protein, at 2,527,141 to 2,527,950 _RS12010 Position (kb) 2525 2526 2527Strain fitness (log2 ratio) -1 0 1at 2524.586 kb on + strand, within BWI76_RS11995at 2524.753 kb on + strandat 2524.847 kb on - strand, within BWI76_RS11995at 2524.861 kb on + strand, within BWI76_RS11995at 2524.986 kb on - strand, within BWI76_RS11995at 2525.011 kb on + strand, within BWI76_RS11995at 2525.050 kb on + strand, within BWI76_RS11995at 2525.469 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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2,524,586 + BWI76_RS11995 0.30 -0.6
2,524,753 + -0.1
2,524,847 - BWI76_RS11995 0.52 -0.4
2,524,861 + BWI76_RS11995 0.54 -0.1
2,524,986 - BWI76_RS11995 0.64 +0.2
2,525,011 + BWI76_RS11995 0.66 -0.0
2,525,050 + BWI76_RS11995 0.70 +0.1
2,525,469 + +0.3

Or see this region's nucleotide sequence