Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08895 and BWI76_RS08900 are separated by 49 nucleotides BWI76_RS08900 and BWI76_RS08905 are separated by 13 nucleotides BWI76_RS08905 and BWI76_RS08910 overlap by 1 nucleotides
BWI76_RS08895: BWI76_RS08895 - MFS transporter, at 1,872,721 to 1,874,052
_RS08895
BWI76_RS08900: BWI76_RS08900 - putative short-chain dehydrogenase/reductase SDR, at 1,874,102 to 1,874,851
_RS08900
BWI76_RS08905: BWI76_RS08905 - transketolase, at 1,874,865 to 1,875,710
_RS08905
BWI76_RS08910: BWI76_RS08910 - transketolase domain-containing protein, at 1,875,710 to 1,876,702
_RS08910
Position (kb)
1874
1875 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1873.102 kb on + strand, within BWI76_RS08895 at 1873.103 kb on + strand, within BWI76_RS08895 at 1873.174 kb on + strand, within BWI76_RS08895 at 1873.230 kb on - strand, within BWI76_RS08895 at 1873.235 kb on - strand, within BWI76_RS08895 at 1873.254 kb on - strand, within BWI76_RS08895 at 1873.254 kb on - strand, within BWI76_RS08895 at 1873.297 kb on - strand, within BWI76_RS08895 at 1873.308 kb on + strand, within BWI76_RS08895 at 1873.308 kb on + strand, within BWI76_RS08895 at 1873.308 kb on + strand, within BWI76_RS08895 at 1873.310 kb on - strand, within BWI76_RS08895 at 1873.313 kb on + strand, within BWI76_RS08895 at 1873.315 kb on + strand, within BWI76_RS08895 at 1873.315 kb on + strand, within BWI76_RS08895 at 1873.315 kb on - strand, within BWI76_RS08895 at 1873.315 kb on - strand, within BWI76_RS08895 at 1873.316 kb on - strand, within BWI76_RS08895 at 1873.316 kb on - strand, within BWI76_RS08895 at 1873.321 kb on - strand, within BWI76_RS08895 at 1873.346 kb on + strand, within BWI76_RS08895 at 1873.354 kb on - strand, within BWI76_RS08895 at 1873.354 kb on - strand, within BWI76_RS08895 at 1873.356 kb on + strand, within BWI76_RS08895 at 1873.356 kb on + strand at 1873.356 kb on + strand, within BWI76_RS08895 at 1873.356 kb on + strand, within BWI76_RS08895 at 1873.356 kb on + strand, within BWI76_RS08895 at 1873.356 kb on + strand, within BWI76_RS08895 at 1873.356 kb on + strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.364 kb on - strand, within BWI76_RS08895 at 1873.454 kb on + strand, within BWI76_RS08895 at 1873.592 kb on + strand, within BWI76_RS08895 at 1873.597 kb on + strand, within BWI76_RS08895 at 1873.605 kb on + strand, within BWI76_RS08895 at 1873.606 kb on + strand, within BWI76_RS08895 at 1873.606 kb on + strand, within BWI76_RS08895 at 1873.606 kb on + strand, within BWI76_RS08895 at 1873.606 kb on + strand, within BWI76_RS08895 at 1873.606 kb on + strand, within BWI76_RS08895 at 1873.606 kb on + strand, within BWI76_RS08895 at 1873.606 kb on + strand, within BWI76_RS08895 at 1873.606 kb on + strand, within BWI76_RS08895 at 1873.606 kb on + strand, within BWI76_RS08895 at 1873.606 kb on + strand, within BWI76_RS08895 at 1873.606 kb on + strand, within BWI76_RS08895 at 1873.607 kb on + strand, within BWI76_RS08895 at 1873.614 kb on - strand, within BWI76_RS08895 at 1873.614 kb on - strand, within BWI76_RS08895 at 1873.624 kb on + strand, within BWI76_RS08895 at 1873.624 kb on + strand, within BWI76_RS08895 at 1873.683 kb on + strand, within BWI76_RS08895 at 1873.684 kb on + strand, within BWI76_RS08895 at 1873.684 kb on + strand, within BWI76_RS08895 at 1873.684 kb on + strand, within BWI76_RS08895 at 1873.684 kb on + strand, within BWI76_RS08895 at 1873.684 kb on + strand, within BWI76_RS08895 at 1873.684 kb on + strand, within BWI76_RS08895 at 1873.692 kb on - strand, within BWI76_RS08895 at 1873.698 kb on + strand, within BWI76_RS08895 at 1873.773 kb on + strand, within BWI76_RS08895 at 1873.773 kb on + strand, within BWI76_RS08895 at 1873.773 kb on + strand, within BWI76_RS08895 at 1873.773 kb on + strand, within BWI76_RS08895 at 1873.775 kb on + strand, within BWI76_RS08895 at 1873.787 kb on + strand, within BWI76_RS08895 at 1873.787 kb on + strand, within BWI76_RS08895 at 1873.842 kb on - strand, within BWI76_RS08895 at 1873.848 kb on + strand, within BWI76_RS08895 at 1873.848 kb on + strand, within BWI76_RS08895 at 1873.848 kb on + strand, within BWI76_RS08895 at 1873.848 kb on + strand, within BWI76_RS08895 at 1873.851 kb on - strand, within BWI76_RS08895 at 1873.852 kb on - strand at 1873.856 kb on - strand, within BWI76_RS08895 at 1873.856 kb on - strand, within BWI76_RS08895 at 1873.856 kb on - strand, within BWI76_RS08895 at 1873.856 kb on - strand, within BWI76_RS08895 at 1873.856 kb on - strand, within BWI76_RS08895 at 1873.856 kb on - strand, within BWI76_RS08895 at 1873.856 kb on - strand, within BWI76_RS08895 at 1873.932 kb on + strand at 1873.940 kb on - strand at 1873.940 kb on - strand at 1873.970 kb on + strand at 1873.970 kb on + strand at 1874.008 kb on + strand at 1874.014 kb on + strand at 1874.015 kb on + strand at 1874.015 kb on + strand at 1874.015 kb on + strand at 1874.015 kb on + strand at 1874.015 kb on + strand at 1874.022 kb on - strand at 1874.022 kb on - strand at 1874.023 kb on - strand at 1874.023 kb on - strand at 1874.042 kb on + strand at 1874.141 kb on + strand at 1874.144 kb on - strand at 1874.149 kb on - strand at 1874.152 kb on + strand at 1874.152 kb on + strand at 1874.154 kb on + strand at 1874.162 kb on - strand at 1874.208 kb on + strand, within BWI76_RS08900 at 1874.208 kb on + strand, within BWI76_RS08900 at 1874.208 kb on + strand, within BWI76_RS08900 at 1874.208 kb on + strand, within BWI76_RS08900 at 1874.216 kb on - strand, within BWI76_RS08900 at 1874.216 kb on - strand, within BWI76_RS08900 at 1874.216 kb on - strand, within BWI76_RS08900 at 1874.218 kb on + strand, within BWI76_RS08900 at 1874.223 kb on - strand, within BWI76_RS08900 at 1874.243 kb on + strand, within BWI76_RS08900 at 1874.249 kb on + strand, within BWI76_RS08900 at 1874.249 kb on + strand, within BWI76_RS08900 at 1874.249 kb on + strand, within BWI76_RS08900 at 1874.251 kb on - strand, within BWI76_RS08900 at 1874.257 kb on - strand, within BWI76_RS08900 at 1874.257 kb on - strand, within BWI76_RS08900 at 1874.263 kb on - strand, within BWI76_RS08900 at 1874.263 kb on - strand, within BWI76_RS08900 at 1874.263 kb on - strand, within BWI76_RS08900 at 1874.273 kb on - strand, within BWI76_RS08900 at 1874.273 kb on - strand, within BWI76_RS08900 at 1874.310 kb on - strand, within BWI76_RS08900 at 1874.329 kb on + strand, within BWI76_RS08900 at 1874.404 kb on - strand, within BWI76_RS08900 at 1874.423 kb on + strand, within BWI76_RS08900 at 1874.430 kb on + strand, within BWI76_RS08900 at 1874.430 kb on + strand, within BWI76_RS08900 at 1874.431 kb on - strand, within BWI76_RS08900 at 1874.682 kb on + strand, within BWI76_RS08900 at 1874.779 kb on - strand at 1874.810 kb on + strand at 1874.951 kb on + strand, within BWI76_RS08905 at 1874.959 kb on - strand, within BWI76_RS08905 at 1874.967 kb on + strand, within BWI76_RS08905 at 1874.975 kb on - strand, within BWI76_RS08905 at 1875.195 kb on - strand, within BWI76_RS08905 at 1875.368 kb on - strand, within BWI76_RS08905 at 1875.447 kb on - strand, within BWI76_RS08905 at 1875.468 kb on + strand, within BWI76_RS08905 at 1875.590 kb on + strand, within BWI76_RS08905 at 1875.592 kb on + strand, within BWI76_RS08905
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 1,873,102 + BWI76_RS08895 0.29 -1.4 1,873,103 + BWI76_RS08895 0.29 +0.1 1,873,174 + BWI76_RS08895 0.34 -0.7 1,873,230 - BWI76_RS08895 0.38 +0.3 1,873,235 - BWI76_RS08895 0.39 -0.7 1,873,254 - BWI76_RS08895 0.40 -0.5 1,873,254 - BWI76_RS08895 0.40 -0.6 1,873,297 - BWI76_RS08895 0.43 -0.2 1,873,308 + BWI76_RS08895 0.44 +0.1 1,873,308 + BWI76_RS08895 0.44 -1.0 1,873,308 + BWI76_RS08895 0.44 -0.4 1,873,310 - BWI76_RS08895 0.44 -0.2 1,873,313 + BWI76_RS08895 0.44 +0.3 1,873,315 + BWI76_RS08895 0.45 -0.9 1,873,315 + BWI76_RS08895 0.45 -0.2 1,873,315 - BWI76_RS08895 0.45 -1.3 1,873,315 - BWI76_RS08895 0.45 -0.4 1,873,316 - BWI76_RS08895 0.45 -0.0 1,873,316 - BWI76_RS08895 0.45 -0.1 1,873,321 - BWI76_RS08895 0.45 -0.0 1,873,346 + BWI76_RS08895 0.47 +0.8 1,873,354 - BWI76_RS08895 0.48 -0.2 1,873,354 - BWI76_RS08895 0.48 +0.8 1,873,356 + BWI76_RS08895 0.48 -2.5 1,873,356 + +0.0 1,873,356 + BWI76_RS08895 0.48 -1.5 1,873,356 + BWI76_RS08895 0.48 +0.3 1,873,356 + BWI76_RS08895 0.48 +2.8 1,873,356 + BWI76_RS08895 0.48 -0.5 1,873,356 + BWI76_RS08895 0.48 +0.2 1,873,364 - BWI76_RS08895 0.48 -0.3 1,873,364 - BWI76_RS08895 0.48 +1.4 1,873,364 - BWI76_RS08895 0.48 +0.2 1,873,364 - BWI76_RS08895 0.48 +0.2 1,873,364 - BWI76_RS08895 0.48 +1.0 1,873,364 - BWI76_RS08895 0.48 -0.3 1,873,364 - BWI76_RS08895 0.48 +1.6 1,873,364 - BWI76_RS08895 0.48 +0.0 1,873,364 - BWI76_RS08895 0.48 +0.2 1,873,364 - BWI76_RS08895 0.48 -0.1 1,873,364 - BWI76_RS08895 0.48 +0.1 1,873,364 - BWI76_RS08895 0.48 +0.2 1,873,364 - BWI76_RS08895 0.48 -0.0 1,873,364 - BWI76_RS08895 0.48 +0.3 1,873,364 - BWI76_RS08895 0.48 +0.8 1,873,364 - BWI76_RS08895 0.48 -0.5 1,873,364 - BWI76_RS08895 0.48 +1.4 1,873,364 - BWI76_RS08895 0.48 -1.4 1,873,364 - BWI76_RS08895 0.48 +0.5 1,873,364 - BWI76_RS08895 0.48 +0.5 1,873,364 - BWI76_RS08895 0.48 +0.4 1,873,364 - BWI76_RS08895 0.48 +0.1 1,873,364 - BWI76_RS08895 0.48 +1.5 1,873,364 - BWI76_RS08895 0.48 +0.7 1,873,364 - BWI76_RS08895 0.48 -0.5 1,873,364 - BWI76_RS08895 0.48 +1.5 1,873,364 - BWI76_RS08895 0.48 +0.3 1,873,364 - BWI76_RS08895 0.48 +0.1 1,873,364 - BWI76_RS08895 0.48 -0.8 1,873,364 - BWI76_RS08895 0.48 +0.1 1,873,364 - BWI76_RS08895 0.48 -0.3 1,873,364 - BWI76_RS08895 0.48 +0.6 1,873,364 - BWI76_RS08895 0.48 -0.2 1,873,364 - BWI76_RS08895 0.48 +0.1 1,873,364 - BWI76_RS08895 0.48 +0.3 1,873,364 - BWI76_RS08895 0.48 +0.3 1,873,454 + BWI76_RS08895 0.55 -1.2 1,873,592 + BWI76_RS08895 0.65 +0.3 1,873,597 + BWI76_RS08895 0.66 -0.3 1,873,605 + BWI76_RS08895 0.66 +1.1 1,873,606 + BWI76_RS08895 0.66 +1.1 1,873,606 + BWI76_RS08895 0.66 +0.1 1,873,606 + BWI76_RS08895 0.66 -1.3 1,873,606 + BWI76_RS08895 0.66 +0.7 1,873,606 + BWI76_RS08895 0.66 -0.9 1,873,606 + BWI76_RS08895 0.66 +1.0 1,873,606 + BWI76_RS08895 0.66 +1.8 1,873,606 + BWI76_RS08895 0.66 +0.5 1,873,606 + BWI76_RS08895 0.66 +0.9 1,873,606 + BWI76_RS08895 0.66 -0.8 1,873,606 + BWI76_RS08895 0.66 -0.3 1,873,607 + BWI76_RS08895 0.67 -0.7 1,873,614 - BWI76_RS08895 0.67 +0.1 1,873,614 - BWI76_RS08895 0.67 -1.5 1,873,624 + BWI76_RS08895 0.68 -0.3 1,873,624 + BWI76_RS08895 0.68 +0.0 1,873,683 + BWI76_RS08895 0.72 +0.5 1,873,684 + BWI76_RS08895 0.72 -0.7 1,873,684 + BWI76_RS08895 0.72 -0.7 1,873,684 + BWI76_RS08895 0.72 +0.8 1,873,684 + BWI76_RS08895 0.72 +0.7 1,873,684 + BWI76_RS08895 0.72 -0.6 1,873,684 + BWI76_RS08895 0.72 +0.4 1,873,692 - BWI76_RS08895 0.73 +1.3 1,873,698 + BWI76_RS08895 0.73 -0.2 1,873,773 + BWI76_RS08895 0.79 +0.1 1,873,773 + BWI76_RS08895 0.79 +0.5 1,873,773 + BWI76_RS08895 0.79 -0.1 1,873,773 + BWI76_RS08895 0.79 -0.5 1,873,775 + BWI76_RS08895 0.79 -0.8 1,873,787 + BWI76_RS08895 0.80 -0.4 1,873,787 + BWI76_RS08895 0.80 +2.3 1,873,842 - BWI76_RS08895 0.84 -0.7 1,873,848 + BWI76_RS08895 0.85 -0.4 1,873,848 + BWI76_RS08895 0.85 +1.3 1,873,848 + BWI76_RS08895 0.85 -0.3 1,873,848 + BWI76_RS08895 0.85 -0.6 1,873,851 - BWI76_RS08895 0.85 -1.0 1,873,852 - +1.6 1,873,856 - BWI76_RS08895 0.85 +1.0 1,873,856 - BWI76_RS08895 0.85 -1.0 1,873,856 - BWI76_RS08895 0.85 -1.6 1,873,856 - BWI76_RS08895 0.85 -1.0 1,873,856 - BWI76_RS08895 0.85 -0.2 1,873,856 - BWI76_RS08895 0.85 +0.6 1,873,856 - BWI76_RS08895 0.85 +0.2 1,873,932 + +1.0 1,873,940 - -0.7 1,873,940 - +0.9 1,873,970 + -0.0 1,873,970 + -0.1 1,874,008 + -0.7 1,874,014 + -0.5 1,874,015 + +0.8 1,874,015 + -0.4 1,874,015 + -0.7 1,874,015 + -0.5 1,874,015 + +0.4 1,874,022 - +0.9 1,874,022 - +0.8 1,874,023 - -0.1 1,874,023 - -0.9 1,874,042 + -0.8 1,874,141 + +0.2 1,874,144 - -0.2 1,874,149 - +0.0 1,874,152 + +0.7 1,874,152 + +0.4 1,874,154 + -0.5 1,874,162 - -0.7 1,874,208 + BWI76_RS08900 0.14 +0.5 1,874,208 + BWI76_RS08900 0.14 -2.4 1,874,208 + BWI76_RS08900 0.14 +0.3 1,874,208 + BWI76_RS08900 0.14 -0.3 1,874,216 - BWI76_RS08900 0.15 -0.2 1,874,216 - BWI76_RS08900 0.15 -0.2 1,874,216 - BWI76_RS08900 0.15 -1.5 1,874,218 + BWI76_RS08900 0.15 +0.4 1,874,223 - BWI76_RS08900 0.16 -0.2 1,874,243 + BWI76_RS08900 0.19 +1.0 1,874,249 + BWI76_RS08900 0.20 +0.3 1,874,249 + BWI76_RS08900 0.20 +0.3 1,874,249 + BWI76_RS08900 0.20 +0.7 1,874,251 - BWI76_RS08900 0.20 +0.3 1,874,257 - BWI76_RS08900 0.21 -0.0 1,874,257 - BWI76_RS08900 0.21 -0.2 1,874,263 - BWI76_RS08900 0.21 +0.0 1,874,263 - BWI76_RS08900 0.21 +0.1 1,874,263 - BWI76_RS08900 0.21 -0.3 1,874,273 - BWI76_RS08900 0.23 -0.8 1,874,273 - BWI76_RS08900 0.23 -1.2 1,874,310 - BWI76_RS08900 0.28 -0.0 1,874,329 + BWI76_RS08900 0.30 -0.5 1,874,404 - BWI76_RS08900 0.40 +0.7 1,874,423 + BWI76_RS08900 0.43 -0.7 1,874,430 + BWI76_RS08900 0.44 +0.4 1,874,430 + BWI76_RS08900 0.44 -0.1 1,874,431 - BWI76_RS08900 0.44 -1.5 1,874,682 + BWI76_RS08900 0.77 -0.3 1,874,779 - -1.1 1,874,810 + -0.9 1,874,951 + BWI76_RS08905 0.10 -0.6 1,874,959 - BWI76_RS08905 0.11 +0.6 1,874,967 + BWI76_RS08905 0.12 -1.0 1,874,975 - BWI76_RS08905 0.13 +0.3 1,875,195 - BWI76_RS08905 0.39 -0.0 1,875,368 - BWI76_RS08905 0.59 +0.5 1,875,447 - BWI76_RS08905 0.69 -0.1 1,875,468 + BWI76_RS08905 0.71 +0.7 1,875,590 + BWI76_RS08905 0.86 +0.3 1,875,592 + BWI76_RS08905 0.86 -0.3
Or see this region's nucleotide sequence