Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07870

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07865 and BWI76_RS07870 are separated by 25 nucleotidesBWI76_RS07870 and BWI76_RS07875 are separated by 5 nucleotides BWI76_RS07865: BWI76_RS07865 - methylthioribulose 1-phosphate dehydratase, at 1,669,390 to 1,670,001 _RS07865 BWI76_RS07870: BWI76_RS07870 - carbohydrate kinase, at 1,670,027 to 1,671,514 _RS07870 BWI76_RS07875: BWI76_RS07875 - dihydrofolate reductase, at 1,671,520 to 1,672,548 _RS07875 Position (kb) 1670 1671 1672Strain fitness (log2 ratio) -1 0 1 2at 1669.233 kb on - strandat 1669.326 kb on + strandat 1669.484 kb on + strand, within BWI76_RS07865at 1669.568 kb on - strand, within BWI76_RS07865at 1669.731 kb on + strand, within BWI76_RS07865at 1670.161 kb on + strandat 1670.169 kb on - strandat 1670.169 kb on - strandat 1670.422 kb on + strand, within BWI76_RS07870at 1671.163 kb on - strand, within BWI76_RS07870at 1671.190 kb on - strand, within BWI76_RS07870at 1671.200 kb on - strand, within BWI76_RS07870at 1671.417 kb on + strandat 1671.478 kb on - strandat 1671.614 kb on - strandat 1671.682 kb on - strand, within BWI76_RS07875at 1671.999 kb on + strand, within BWI76_RS07875at 1672.036 kb on - strand, within BWI76_RS07875at 1672.102 kb on - strand, within BWI76_RS07875at 1672.234 kb on - strand, within BWI76_RS07875

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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1,669,233 - -0.1
1,669,326 + +0.6
1,669,484 + BWI76_RS07865 0.15 +0.7
1,669,568 - BWI76_RS07865 0.29 -0.7
1,669,731 + BWI76_RS07865 0.56 +2.2
1,670,161 + +0.7
1,670,169 - +0.1
1,670,169 - -0.1
1,670,422 + BWI76_RS07870 0.27 +0.4
1,671,163 - BWI76_RS07870 0.76 +0.1
1,671,190 - BWI76_RS07870 0.78 +0.8
1,671,200 - BWI76_RS07870 0.79 -0.1
1,671,417 + +0.7
1,671,478 - -0.1
1,671,614 - +0.3
1,671,682 - BWI76_RS07875 0.16 +0.1
1,671,999 + BWI76_RS07875 0.47 -0.7
1,672,036 - BWI76_RS07875 0.50 +0.0
1,672,102 - BWI76_RS07875 0.57 -0.4
1,672,234 - BWI76_RS07875 0.69 -0.2

Or see this region's nucleotide sequence