Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07645 and BWI76_RS07650 are separated by 60 nucleotides BWI76_RS07650 and BWI76_RS07655 are separated by 17 nucleotides
BWI76_RS07645: BWI76_RS07645 - short-chain dehydrogenase/reductase, at 1,618,930 to 1,619,727
_RS07645
BWI76_RS07650: BWI76_RS07650 - ABC transporter permease, at 1,619,788 to 1,620,843
_RS07650
BWI76_RS07655: BWI76_RS07655 - putative ribose ABC transport system ATP-binding component, at 1,620,861 to 1,622,405
_RS07655
Position (kb)
1619
1620
1621 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1619.180 kb on - strand, within BWI76_RS07645 at 1619.468 kb on - strand, within BWI76_RS07645 at 1619.745 kb on - strand at 1619.828 kb on - strand at 1619.838 kb on + strand at 1620.092 kb on + strand, within BWI76_RS07650 at 1620.368 kb on + strand, within BWI76_RS07650 at 1620.376 kb on - strand, within BWI76_RS07650 at 1620.667 kb on - strand, within BWI76_RS07650 at 1620.726 kb on + strand, within BWI76_RS07650 at 1620.734 kb on - strand, within BWI76_RS07650 at 1620.734 kb on - strand, within BWI76_RS07650 at 1620.893 kb on + strand at 1621.299 kb on + strand, within BWI76_RS07655 at 1621.358 kb on - strand, within BWI76_RS07655 at 1621.465 kb on + strand, within BWI76_RS07655 at 1621.466 kb on - strand, within BWI76_RS07655 at 1621.473 kb on - strand, within BWI76_RS07655 at 1621.473 kb on - strand, within BWI76_RS07655 at 1621.497 kb on - strand, within BWI76_RS07655 at 1621.539 kb on + strand at 1621.546 kb on + strand, within BWI76_RS07655 at 1621.546 kb on + strand, within BWI76_RS07655 at 1621.554 kb on - strand, within BWI76_RS07655 at 1621.556 kb on - strand, within BWI76_RS07655 at 1621.561 kb on - strand, within BWI76_RS07655 at 1621.588 kb on - strand, within BWI76_RS07655 at 1621.689 kb on - strand, within BWI76_RS07655 at 1621.760 kb on + strand, within BWI76_RS07655 at 1621.771 kb on - strand, within BWI76_RS07655 at 1621.785 kb on + strand, within BWI76_RS07655 at 1621.811 kb on - strand, within BWI76_RS07655 at 1621.814 kb on + strand, within BWI76_RS07655 at 1621.830 kb on - strand, within BWI76_RS07655
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 1,619,180 - BWI76_RS07645 0.31 -0.4 1,619,468 - BWI76_RS07645 0.67 -1.9 1,619,745 - -0.4 1,619,828 - -0.1 1,619,838 + +0.3 1,620,092 + BWI76_RS07650 0.29 -0.1 1,620,368 + BWI76_RS07650 0.55 -0.2 1,620,376 - BWI76_RS07650 0.56 +0.2 1,620,667 - BWI76_RS07650 0.83 +0.3 1,620,726 + BWI76_RS07650 0.89 +0.3 1,620,734 - BWI76_RS07650 0.90 -0.7 1,620,734 - BWI76_RS07650 0.90 +0.1 1,620,893 + -0.3 1,621,299 + BWI76_RS07655 0.28 -0.6 1,621,358 - BWI76_RS07655 0.32 -2.9 1,621,465 + BWI76_RS07655 0.39 -0.2 1,621,466 - BWI76_RS07655 0.39 +1.3 1,621,473 - BWI76_RS07655 0.40 +0.0 1,621,473 - BWI76_RS07655 0.40 +0.4 1,621,497 - BWI76_RS07655 0.41 +0.3 1,621,539 + +0.4 1,621,546 + BWI76_RS07655 0.44 +0.2 1,621,546 + BWI76_RS07655 0.44 -2.2 1,621,554 - BWI76_RS07655 0.45 +0.0 1,621,556 - BWI76_RS07655 0.45 -0.6 1,621,561 - BWI76_RS07655 0.45 +0.2 1,621,588 - BWI76_RS07655 0.47 +0.3 1,621,689 - BWI76_RS07655 0.54 -0.2 1,621,760 + BWI76_RS07655 0.58 -0.9 1,621,771 - BWI76_RS07655 0.59 -0.4 1,621,785 + BWI76_RS07655 0.60 +0.8 1,621,811 - BWI76_RS07655 0.61 -2.2 1,621,814 + BWI76_RS07655 0.62 -0.2 1,621,830 - BWI76_RS07655 0.63 +0.2
Or see this region's nucleotide sequence