Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07650

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07645 and BWI76_RS07650 are separated by 60 nucleotidesBWI76_RS07650 and BWI76_RS07655 are separated by 17 nucleotides BWI76_RS07645: BWI76_RS07645 - short-chain dehydrogenase/reductase, at 1,618,930 to 1,619,727 _RS07645 BWI76_RS07650: BWI76_RS07650 - ABC transporter permease, at 1,619,788 to 1,620,843 _RS07650 BWI76_RS07655: BWI76_RS07655 - putative ribose ABC transport system ATP-binding component, at 1,620,861 to 1,622,405 _RS07655 Position (kb) 1619 1620 1621Strain fitness (log2 ratio) -3 -2 -1 0 1at 1619.180 kb on - strand, within BWI76_RS07645at 1619.468 kb on - strand, within BWI76_RS07645at 1619.745 kb on - strandat 1619.828 kb on - strandat 1619.838 kb on + strandat 1620.092 kb on + strand, within BWI76_RS07650at 1620.368 kb on + strand, within BWI76_RS07650at 1620.376 kb on - strand, within BWI76_RS07650at 1620.667 kb on - strand, within BWI76_RS07650at 1620.726 kb on + strand, within BWI76_RS07650at 1620.734 kb on - strand, within BWI76_RS07650at 1620.734 kb on - strand, within BWI76_RS07650at 1620.893 kb on + strandat 1621.299 kb on + strand, within BWI76_RS07655at 1621.358 kb on - strand, within BWI76_RS07655at 1621.465 kb on + strand, within BWI76_RS07655at 1621.466 kb on - strand, within BWI76_RS07655at 1621.473 kb on - strand, within BWI76_RS07655at 1621.473 kb on - strand, within BWI76_RS07655at 1621.497 kb on - strand, within BWI76_RS07655at 1621.539 kb on + strandat 1621.546 kb on + strand, within BWI76_RS07655at 1621.546 kb on + strand, within BWI76_RS07655at 1621.554 kb on - strand, within BWI76_RS07655at 1621.556 kb on - strand, within BWI76_RS07655at 1621.561 kb on - strand, within BWI76_RS07655at 1621.588 kb on - strand, within BWI76_RS07655at 1621.689 kb on - strand, within BWI76_RS07655at 1621.760 kb on + strand, within BWI76_RS07655at 1621.771 kb on - strand, within BWI76_RS07655at 1621.785 kb on + strand, within BWI76_RS07655at 1621.811 kb on - strand, within BWI76_RS07655at 1621.814 kb on + strand, within BWI76_RS07655at 1621.830 kb on - strand, within BWI76_RS07655

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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1,619,180 - BWI76_RS07645 0.31 -0.4
1,619,468 - BWI76_RS07645 0.67 -1.9
1,619,745 - -0.4
1,619,828 - -0.1
1,619,838 + +0.3
1,620,092 + BWI76_RS07650 0.29 -0.1
1,620,368 + BWI76_RS07650 0.55 -0.2
1,620,376 - BWI76_RS07650 0.56 +0.2
1,620,667 - BWI76_RS07650 0.83 +0.3
1,620,726 + BWI76_RS07650 0.89 +0.3
1,620,734 - BWI76_RS07650 0.90 -0.7
1,620,734 - BWI76_RS07650 0.90 +0.1
1,620,893 + -0.3
1,621,299 + BWI76_RS07655 0.28 -0.6
1,621,358 - BWI76_RS07655 0.32 -2.9
1,621,465 + BWI76_RS07655 0.39 -0.2
1,621,466 - BWI76_RS07655 0.39 +1.3
1,621,473 - BWI76_RS07655 0.40 +0.0
1,621,473 - BWI76_RS07655 0.40 +0.4
1,621,497 - BWI76_RS07655 0.41 +0.3
1,621,539 + +0.4
1,621,546 + BWI76_RS07655 0.44 +0.2
1,621,546 + BWI76_RS07655 0.44 -2.2
1,621,554 - BWI76_RS07655 0.45 +0.0
1,621,556 - BWI76_RS07655 0.45 -0.6
1,621,561 - BWI76_RS07655 0.45 +0.2
1,621,588 - BWI76_RS07655 0.47 +0.3
1,621,689 - BWI76_RS07655 0.54 -0.2
1,621,760 + BWI76_RS07655 0.58 -0.9
1,621,771 - BWI76_RS07655 0.59 -0.4
1,621,785 + BWI76_RS07655 0.60 +0.8
1,621,811 - BWI76_RS07655 0.61 -2.2
1,621,814 + BWI76_RS07655 0.62 -0.2
1,621,830 - BWI76_RS07655 0.63 +0.2

Or see this region's nucleotide sequence