Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07315

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07310 and BWI76_RS07315 overlap by 1 nucleotidesBWI76_RS07315 and BWI76_RS07320 are separated by 136 nucleotides BWI76_RS07310: BWI76_RS07310 - sucrose-6-phosphate hydrolase, at 1,539,118 to 1,540,518 _RS07310 BWI76_RS07315: BWI76_RS07315 - PTS sugar transporter, at 1,540,518 to 1,541,888 _RS07315 BWI76_RS07320: BWI76_RS07320 - carbohydrate porin, at 1,542,025 to 1,543,542 _RS07320 Position (kb) 1540 1541 1542Strain fitness (log2 ratio) -1 0 1 2at 1539.827 kb on + strand, within BWI76_RS07310at 1539.831 kb on - strand, within BWI76_RS07310at 1539.855 kb on + strand, within BWI76_RS07310at 1539.958 kb on - strand, within BWI76_RS07310at 1540.172 kb on + strand, within BWI76_RS07310at 1540.523 kb on - strandat 1540.523 kb on - strandat 1540.594 kb on + strandat 1540.662 kb on + strand, within BWI76_RS07315at 1540.662 kb on + strand, within BWI76_RS07315at 1540.662 kb on + strand, within BWI76_RS07315at 1540.774 kb on - strand, within BWI76_RS07315at 1540.847 kb on + strand, within BWI76_RS07315at 1540.855 kb on - strand, within BWI76_RS07315at 1540.992 kb on - strand, within BWI76_RS07315at 1541.183 kb on - strand, within BWI76_RS07315at 1541.310 kb on - strand, within BWI76_RS07315at 1541.316 kb on - strand, within BWI76_RS07315at 1542.238 kb on - strand, within BWI76_RS07320at 1542.384 kb on + strand, within BWI76_RS07320at 1542.441 kb on + strand, within BWI76_RS07320at 1542.441 kb on + strand, within BWI76_RS07320at 1542.536 kb on + strand, within BWI76_RS07320at 1542.536 kb on + strand, within BWI76_RS07320at 1542.536 kb on + strandat 1542.536 kb on - strand, within BWI76_RS07320at 1542.544 kb on - strand, within BWI76_RS07320at 1542.748 kb on - strand, within BWI76_RS07320

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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1,539,827 + BWI76_RS07310 0.51 -0.7
1,539,831 - BWI76_RS07310 0.51 -0.2
1,539,855 + BWI76_RS07310 0.53 -0.0
1,539,958 - BWI76_RS07310 0.60 -0.5
1,540,172 + BWI76_RS07310 0.75 -0.4
1,540,523 - -0.4
1,540,523 - +0.4
1,540,594 + -0.5
1,540,662 + BWI76_RS07315 0.11 -1.1
1,540,662 + BWI76_RS07315 0.11 +0.3
1,540,662 + BWI76_RS07315 0.11 -0.1
1,540,774 - BWI76_RS07315 0.19 +0.7
1,540,847 + BWI76_RS07315 0.24 -0.4
1,540,855 - BWI76_RS07315 0.25 -0.4
1,540,992 - BWI76_RS07315 0.35 +0.3
1,541,183 - BWI76_RS07315 0.49 -0.5
1,541,310 - BWI76_RS07315 0.58 +0.0
1,541,316 - BWI76_RS07315 0.58 -0.3
1,542,238 - BWI76_RS07320 0.14 -0.2
1,542,384 + BWI76_RS07320 0.24 +0.7
1,542,441 + BWI76_RS07320 0.27 -0.1
1,542,441 + BWI76_RS07320 0.27 +0.8
1,542,536 + BWI76_RS07320 0.34 -0.2
1,542,536 + BWI76_RS07320 0.34 -0.2
1,542,536 + +2.4
1,542,536 - BWI76_RS07320 0.34 -0.0
1,542,544 - BWI76_RS07320 0.34 -0.6
1,542,748 - BWI76_RS07320 0.48 -0.2

Or see this region's nucleotide sequence