Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05550 and BWI76_RS05555 are separated by 57 nucleotides BWI76_RS05555 and BWI76_RS05560 are separated by 76 nucleotides BWI76_RS05560 and BWI76_RS05565 are separated by 2 nucleotides
BWI76_RS05550: BWI76_RS05550 - fermentation/respiration switch protein, at 1,162,885 to 1,164,129
_RS05550
BWI76_RS05555: BWI76_RS05555 - Crl family RNA polymerase assembly factor, at 1,164,187 to 1,164,585
_RS05555
BWI76_RS05560: BWI76_RS05560 - serine acetyltransferase, at 1,164,662 to 1,165,168
_RS05560
BWI76_RS05565: BWI76_RS05565 - beta-galactosidase, at 1,165,171 to 1,166,589
_RS05565
Position (kb) 1164
1165
1166 Strain fitness (log2 ratio) -1
0
1
2 at 1163.768 kb on + strand, within BWI76_RS05550 at 1163.776 kb on - strand, within BWI76_RS05550 at 1163.776 kb on - strand, within BWI76_RS05550 at 1163.928 kb on - strand, within BWI76_RS05550 at 1163.958 kb on + strand, within BWI76_RS05550 at 1164.077 kb on - strand at 1164.121 kb on - strand at 1164.167 kb on - strand at 1164.198 kb on - strand at 1164.207 kb on + strand at 1164.207 kb on + strand at 1164.215 kb on - strand at 1164.296 kb on + strand, within BWI76_RS05555 at 1164.396 kb on - strand, within BWI76_RS05555 at 1165.323 kb on - strand, within BWI76_RS05565 at 1165.330 kb on + strand, within BWI76_RS05565 at 1165.348 kb on - strand, within BWI76_RS05565 at 1165.348 kb on - strand, within BWI76_RS05565 at 1165.383 kb on + strand, within BWI76_RS05565 at 1165.614 kb on + strand, within BWI76_RS05565 at 1165.616 kb on + strand, within BWI76_RS05565 at 1165.616 kb on + strand, within BWI76_RS05565 at 1165.652 kb on + strand, within BWI76_RS05565 at 1165.659 kb on - strand, within BWI76_RS05565 at 1165.670 kb on + strand, within BWI76_RS05565 at 1165.678 kb on - strand, within BWI76_RS05565 at 1165.849 kb on - strand, within BWI76_RS05565 at 1165.880 kb on + strand, within BWI76_RS05565 at 1165.880 kb on + strand, within BWI76_RS05565 at 1165.880 kb on + strand, within BWI76_RS05565 at 1165.937 kb on + strand, within BWI76_RS05565
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 1,163,768 + BWI76_RS05550 0.71 +0.5 1,163,776 - BWI76_RS05550 0.72 -0.1 1,163,776 - BWI76_RS05550 0.72 +0.3 1,163,928 - BWI76_RS05550 0.84 -0.2 1,163,958 + BWI76_RS05550 0.86 +2.0 1,164,077 - +1.0 1,164,121 - +0.1 1,164,167 - +0.5 1,164,198 - +0.2 1,164,207 + +0.5 1,164,207 + +1.2 1,164,215 - +0.9 1,164,296 + BWI76_RS05555 0.27 +0.7 1,164,396 - BWI76_RS05555 0.52 +0.3 1,165,323 - BWI76_RS05565 0.11 +0.4 1,165,330 + BWI76_RS05565 0.11 +0.2 1,165,348 - BWI76_RS05565 0.12 +0.3 1,165,348 - BWI76_RS05565 0.12 -0.2 1,165,383 + BWI76_RS05565 0.15 +0.6 1,165,614 + BWI76_RS05565 0.31 +0.6 1,165,616 + BWI76_RS05565 0.31 -0.0 1,165,616 + BWI76_RS05565 0.31 +0.7 1,165,652 + BWI76_RS05565 0.34 +0.3 1,165,659 - BWI76_RS05565 0.34 -0.7 1,165,670 + BWI76_RS05565 0.35 +1.3 1,165,678 - BWI76_RS05565 0.36 +0.1 1,165,849 - BWI76_RS05565 0.48 +0.4 1,165,880 + BWI76_RS05565 0.50 +0.4 1,165,880 + BWI76_RS05565 0.50 +0.3 1,165,880 + BWI76_RS05565 0.50 -0.3 1,165,937 + BWI76_RS05565 0.54 +0.0
Or see this region's nucleotide sequence