Strain Fitness in Shewanella loihica PV-4 around Shew_3553

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
4,241,931	+				-0.0
4,242,254	+				+0.5
4,242,618	+		Shew_3553	0.18	-1.2
4,242,626	-		Shew_3553	0.18	-0.6
4,242,664	+		Shew_3553	0.20	-2.1
4,243,086	+		Shew_3553	0.43	-0.9
4,243,093	+		Shew_3553	0.44	-2.1
4,243,336	+		Shew_3553	0.57	-0.4
4,243,336	+		Shew_3553	0.57	-0.4
4,243,344	-		Shew_3553	0.58	-1.1
4,243,397	-		Shew_3553	0.60	-0.5
4,243,612	+		Shew_3553	0.72	-0.2
4,243,752	+		Shew_3553	0.80	-0.6
4,243,846	-		Shew_3553	0.85	-3.2
4,244,027	+				-0.3
4,244,126	+				-0.7
4,244,134	-				-0.3
4,244,242	+				+0.2
4,244,250	-				+1.1
4,244,282	-				-2.7
4,244,412	+				+4.9
4,244,420	-				+3.9
4,244,469	-				+4.5
4,244,566	+				+3.5
4,244,576	+				+3.7
4,244,987	+	glnA	Shew_3554	0.35	+4.3
4,244,997	+	glnA	Shew_3554	0.36	+4.0