Strain Fitness in Shewanella loihica PV-4 around Shew_3429
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,091,442 | + | Shew_3428 | 0.83 | -0.1 | |
4,091,589 | - | Shew_3428 | 0.86 | +0.4 | |
4,091,663 | + | Shew_3428 | 0.88 | +0.1 | |
4,091,721 | - | Shew_3428 | 0.89 | +0.1 | |
4,091,758 | - | -0.6 | |||
4,092,008 | + | +0.1 | |||
4,092,018 | + | +0.2 | |||
4,092,021 | - | +0.5 | |||
4,092,051 | - | +0.3 | |||
4,092,366 | - | +4.9 | |||
4,094,112 | + | +4.5 |
Or see this region's nucleotide sequence