Strain Fitness in Shewanella loihica PV-4 around Shew_3169
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,771,752 | - | Shew_3168 | 0.53 | +0.2 | |
3,771,752 | - | Shew_3168 | 0.53 | -0.9 | |
3,771,872 | - | Shew_3168 | 0.70 | -0.9 | |
3,772,154 | - | -0.1 | |||
3,772,188 | + | -0.1 | |||
3,772,188 | - | +0.4 | |||
3,772,269 | + | -0.0 | |||
3,772,342 | + | -0.4 | |||
3,773,239 | + | -0.2 | |||
3,773,367 | + | -0.1 | |||
3,773,450 | + | Shew_3170 | 0.12 | -1.9 | |
3,773,743 | + | Shew_3170 | 0.37 | -0.0 | |
3,773,751 | - | Shew_3170 | 0.38 | -0.4 | |
3,773,946 | + | Shew_3170 | 0.54 | -0.2 | |
3,774,247 | + | Shew_3170 | 0.79 | -0.2 |
Or see this region's nucleotide sequence