Strain Fitness in Shewanella loihica PV-4 around Shew_2923
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,460,829 | - | +1.1 | |||
3,461,144 | - | Shew_2922 | 0.34 | -0.1 | |
3,461,205 | + | Shew_2922 | 0.54 | +0.3 | |
3,461,236 | + | Shew_2922 | 0.64 | -0.1 | |
3,461,498 | + | -2.3 | |||
3,461,660 | + | Shew_2923 | 0.15 | -0.7 | |
3,461,948 | - | Shew_2923 | 0.35 | -1.4 | |
3,461,954 | + | Shew_2923 | 0.36 | -1.4 | |
3,462,023 | - | Shew_2923 | 0.41 | -1.5 | |
3,462,253 | + | Shew_2923 | 0.57 | -1.4 | |
3,462,454 | - | Shew_2923 | 0.71 | -2.1 |
Or see this region's nucleotide sequence