Strain Fitness in Shewanella loihica PV-4 around Shew_1562
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,791,965 | - | Shew_1561 | 0.23 | +0.9 | |
1,791,986 | + | Shew_1561 | 0.27 | -0.1 | |
1,792,060 | - | Shew_1561 | 0.44 | +0.1 | |
1,792,179 | - | Shew_1561 | 0.70 | +0.0 | |
1,792,642 | - | Shew_1562 | 0.40 | -2.1 | |
1,792,895 | + | Shew_1562 | 0.72 | -0.5 | |
1,793,821 | - | Shew_1563 | 0.19 | +3.6 |
Or see this region's nucleotide sequence