Strain Fitness in Shewanella loihica PV-4 around Shew_1510
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,731,253 | - | asnB | Shew_1509 | 0.64 | +0.6 |
1,731,253 | - | asnB | Shew_1509 | 0.64 | +0.3 |
1,731,408 | + | asnB | Shew_1509 | 0.73 | -0.3 |
1,731,416 | - | asnB | Shew_1509 | 0.74 | -0.1 |
1,731,739 | + | +0.2 | |||
1,731,883 | + | -0.8 | |||
1,732,769 | - | Shew_1510 | 0.35 | -0.4 | |
1,733,286 | - | Shew_1510 | 0.66 | -1.6 | |
1,733,816 | + | -0.1 | |||
1,733,832 | - | -0.5 | |||
1,734,148 | - | +0.0 | |||
1,734,290 | + | Shew_1511 | 0.29 | -0.5 | |
1,734,367 | + | Shew_1511 | 0.39 | +0.9 |
Or see this region's nucleotide sequence