Strain Fitness in Shewanella loihica PV-4 around Shew_1417

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
1,629,902	+		Shew_1416	0.21	+1.2
1,629,902	+		Shew_1416	0.21	+0.2
1,629,907	+		Shew_1416	0.21	+0.4
1,629,907	+		Shew_1416	0.21	+1.2
1,629,910	-		Shew_1416	0.22	+1.3
1,629,912	+		Shew_1416	0.22	+1.1
1,629,915	-		Shew_1416	0.22	+1.2
1,629,915	-		Shew_1416	0.22	+1.7
1,629,920	-		Shew_1416	0.23	+1.2
1,630,007	+		Shew_1416	0.31	+0.6
1,630,024	-		Shew_1416	0.32	+1.2
1,630,051	+		Shew_1416	0.35	+0.9
1,630,157	+		Shew_1416	0.45	+0.9
1,630,172	+		Shew_1416	0.46	+0.4
1,630,202	+		Shew_1416	0.49	+0.7
1,630,210	-		Shew_1416	0.50	-1.1
1,630,210	-		Shew_1416	0.50	+1.1
1,630,210	-		Shew_1416	0.50	+1.0
1,630,239	+		Shew_1416	0.52	+0.4
1,630,265	-		Shew_1416	0.55	+1.6
1,630,298	+		Shew_1416	0.58	+0.4
1,630,308	+		Shew_1416	0.59	+0.6
1,630,314	-		Shew_1416	0.59	+2.8
1,630,419	-		Shew_1416	0.69	+0.9
1,630,521	-		Shew_1416	0.79	+1.5
1,630,604	+		Shew_1416	0.87	+0.4
1,630,721	+				+0.7
1,630,728	+				+0.3
1,630,749	-				+1.2
1,630,749	-				+0.7
1,630,763	+				+0.4
1,630,814	+				+0.9
1,630,815	+				+1.0
1,630,822	+				+0.7
1,630,830	-				+1.3
1,630,846	+				+0.3
1,630,854	+				+1.1
1,630,856	+				+0.9
1,630,860	+				+2.2
1,630,915	-				+1.2
1,630,917	-				+0.6
1,630,929	+				+0.2
1,631,189	+		Shew_1417	0.28	+1.2
1,631,202	+		Shew_1417	0.29	+1.0
1,631,280	+		Shew_1417	0.36	+1.0
1,631,360	+		Shew_1417	0.44	+1.2
1,631,388	-		Shew_1417	0.47	+1.3
1,631,390	-		Shew_1417	0.47	+0.9
1,631,396	+		Shew_1417	0.48	+5.0
1,631,403	-		Shew_1417	0.48	+1.1
1,631,426	-		Shew_1417	0.50	+0.8
1,631,426	-		Shew_1417	0.50	+1.3
1,631,550	-		Shew_1417	0.62	+1.7
1,631,562	+		Shew_1417	0.63	+0.9
1,631,569	+		Shew_1417	0.64	+1.2
1,631,569	+		Shew_1417	0.64	+0.7
1,631,577	-		Shew_1417	0.65	-0.3
1,631,642	-		Shew_1417	0.71	+0.6
1,631,803	-		Shew_1417	0.86	+1.1
1,631,884	+				+1.8
1,631,971	+				-0.2
1,631,979	-				+0.0
1,632,044	+				-0.3
1,632,046	+				+0.4
1,632,046	+				-1.0
1,632,046	+				-0.4
1,632,054	-				+0.1
1,632,054	-				-0.6
1,632,059	+				-0.1
1,632,067	-		Shew_1418	0.10	+0.6
1,632,080	+		Shew_1418	0.12	-0.3
1,632,228	-		Shew_1418	0.28	+0.1
1,632,409	+		Shew_1418	0.47	+0.4
1,632,412	-		Shew_1418	0.48	-0.1
1,632,412	-		Shew_1418	0.48	+0.0
1,632,417	-		Shew_1418	0.48	-0.2
1,632,417	-		Shew_1418	0.48	-1.1
1,632,467	+		Shew_1418	0.54	-0.2
1,632,756	+		Shew_1418	0.85	-0.3
1,632,797	-		Shew_1418	0.90	-0.0