Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0257 and Shew_0258 are separated by 101 nucleotides Shew_0258 and Shew_0259 are separated by 112 nucleotides Shew_0259 and Shew_0260 are separated by 322 nucleotides
Shew_0257: Shew_0257 - peptidase S9 prolyl oligopeptidase (RefSeq), at 275,574 to 277,652
_0257
Shew_0258: Shew_0258 - hypothetical protein (RefSeq), at 277,754 to 278,701
_0258
Shew_0259: Shew_0259 - hypothetical protein (RefSeq), at 278,814 to 279,215
_0259
Shew_0260: Shew_0260 - hypothetical protein (RefSeq), at 279,538 to 280,386
_0260
Position (kb) 277
278
279 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 276.901 kb on + strand, within Shew_0257 at 276.909 kb on - strand, within Shew_0257 at 276.909 kb on - strand, within Shew_0257 at 277.028 kb on + strand, within Shew_0257 at 277.028 kb on + strand, within Shew_0257 at 277.028 kb on + strand, within Shew_0257 at 277.078 kb on + strand, within Shew_0257 at 277.254 kb on + strand, within Shew_0257 at 277.264 kb on + strand, within Shew_0257 at 277.272 kb on + strand, within Shew_0257 at 277.356 kb on + strand, within Shew_0257 at 277.506 kb on + strand at 277.598 kb on - strand at 277.894 kb on + strand, within Shew_0258 at 278.082 kb on - strand, within Shew_0258 at 278.084 kb on + strand, within Shew_0258 at 278.084 kb on + strand, within Shew_0258 at 278.092 kb on - strand, within Shew_0258 at 278.092 kb on - strand, within Shew_0258 at 278.187 kb on + strand, within Shew_0258 at 278.187 kb on + strand, within Shew_0258 at 278.195 kb on - strand, within Shew_0258 at 278.453 kb on - strand, within Shew_0258 at 278.453 kb on - strand, within Shew_0258 at 278.562 kb on - strand, within Shew_0258 at 278.562 kb on - strand, within Shew_0258 at 278.613 kb on + strand at 278.847 kb on - strand at 278.902 kb on + strand, within Shew_0259 at 279.095 kb on + strand, within Shew_0259 at 279.103 kb on - strand, within Shew_0259 at 279.239 kb on + strand at 279.256 kb on - strand at 279.515 kb on + strand at 279.583 kb on - strand at 279.593 kb on - strand at 279.598 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 276,901 + Shew_0257 0.64 -0.2 276,909 - Shew_0257 0.64 -0.7 276,909 - Shew_0257 0.64 +0.3 277,028 + Shew_0257 0.70 +0.2 277,028 + Shew_0257 0.70 +0.4 277,028 + Shew_0257 0.70 +1.5 277,078 + Shew_0257 0.72 -0.0 277,254 + Shew_0257 0.81 -0.2 277,264 + Shew_0257 0.81 +0.3 277,272 + Shew_0257 0.82 +0.0 277,356 + Shew_0257 0.86 -0.0 277,506 + -0.4 277,598 - +0.2 277,894 + Shew_0258 0.15 -1.6 278,082 - Shew_0258 0.35 -0.8 278,084 + Shew_0258 0.35 -1.7 278,084 + Shew_0258 0.35 -0.2 278,092 - Shew_0258 0.36 +0.1 278,092 - Shew_0258 0.36 +0.5 278,187 + Shew_0258 0.46 +0.1 278,187 + Shew_0258 0.46 -0.4 278,195 - Shew_0258 0.47 -0.6 278,453 - Shew_0258 0.74 +0.0 278,453 - Shew_0258 0.74 +0.4 278,562 - Shew_0258 0.85 -3.7 278,562 - Shew_0258 0.85 -0.4 278,613 + +0.4 278,847 - +0.4 278,902 + Shew_0259 0.22 +0.0 279,095 + Shew_0259 0.70 +0.0 279,103 - Shew_0259 0.72 +0.6 279,239 + -0.3 279,256 - -0.5 279,515 + -0.3 279,583 - -0.2 279,593 - +0.3 279,598 - +0.5
Or see this region's nucleotide sequence