Strain Fitness in Shewanella loihica PV-4 around Shew_0199
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
209,646 | - | Shew_0198 | 0.32 | -0.1 | |
209,735 | - | Shew_0198 | 0.39 | -3.1 | |
209,857 | + | Shew_0198 | 0.48 | -0.1 | |
209,962 | + | Shew_0198 | 0.57 | +1.1 | |
210,152 | + | Shew_0198 | 0.72 | -0.8 | |
210,152 | + | Shew_0198 | 0.72 | -0.2 | |
210,420 | + | -2.5 | |||
210,449 | + | -0.2 | |||
210,457 | - | +0.1 | |||
210,719 | + | Shew_0199 | 0.27 | +0.1 | |
210,749 | - | Shew_0199 | 0.33 | +1.6 | |
210,777 | + | Shew_0199 | 0.38 | +0.1 | |
211,249 | - | +0.1 | |||
211,426 | - | Shew_0200 | 0.12 | +0.8 | |
211,860 | + | Shew_0200 | 0.28 | +0.4 | |
211,868 | - | Shew_0200 | 0.29 | +2.3 | |
211,868 | - | Shew_0200 | 0.29 | +0.1 | |
211,991 | + | Shew_0200 | 0.33 | -0.9 | |
212,044 | + | Shew_0200 | 0.35 | +0.1 |
Or see this region's nucleotide sequence