Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3035

Experiment: Bile salts 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.5 mg/ml
3,842,376	-				-2.7
3,842,376	-				-1.4
3,842,402	-				-1.5
3,842,472	-				-3.9
3,842,474	-				-3.5
3,842,594	+				-0.9
3,842,874	+		BT3035	0.27	-2.6
3,842,875	-		BT3035	0.27	-3.7
3,842,973	+		BT3035	0.33	-1.5
3,842,973	+		BT3035	0.33	-0.9
3,842,978	+		BT3035	0.33	-2.0
3,842,978	+		BT3035	0.33	-1.7
3,842,978	+		BT3035	0.33	-2.0
3,842,979	-		BT3035	0.33	-1.5
3,843,004	+		BT3035	0.35	-2.0
3,843,148	+		BT3035	0.44	-2.7
3,843,302	-		BT3035	0.54	-0.1
3,843,357	+		BT3035	0.57	-3.8
3,843,365	+		BT3035	0.58	-1.5
3,843,451	+		BT3035	0.63	-2.0
3,843,452	-		BT3035	0.63	-1.5
3,843,455	-		BT3035	0.63	-2.7
3,843,506	-		BT3035	0.66	-0.5
3,843,510	+		BT3035	0.67	-3.8
3,843,521	+		BT3035	0.67	-2.8
3,843,522	-		BT3035	0.67	-3.9
3,843,522	-		BT3035	0.67	-5.3
3,843,660	+		BT3035	0.76	-0.9
3,843,670	+		BT3035	0.77	-0.5
3,843,762	+		BT3035	0.83	-4.3
3,843,766	+		BT3035	0.83	-1.7
3,843,766	+		BT3035	0.83	-2.5
3,843,967	-				-1.4
3,843,967	-				-2.0
3,844,089	+				-0.7
3,844,090	-				+0.5
3,844,090	-				+2.2
3,844,093	-				+0.9
3,844,099	-				+0.1
3,844,118	+				+0.5
3,844,118	+				-0.4
3,844,124	-				-0.5
3,844,124	-				+0.3
3,844,425	+		BT3036	0.12	-0.4
3,844,480	+		BT3036	0.14	-0.3
3,844,481	-		BT3036	0.14	-0.8
3,844,482	+		BT3036	0.14	-0.2
3,844,629	+		BT3036	0.20	-1.0
3,844,630	-		BT3036	0.20	+1.5
3,844,633	+		BT3036	0.20	-0.1
3,844,633	+		BT3036	0.20	-1.2
3,844,634	-		BT3036	0.20	-0.1
3,844,714	+		BT3036	0.23	-1.5
3,844,714	+		BT3036	0.23	-0.9
3,844,715	-		BT3036	0.23	-1.1
3,844,742	-		BT3036	0.24	-1.1
3,844,775	-		BT3036	0.25	-0.7
3,844,892	-		BT3036	0.30	+1.5
3,844,952	-		BT3036	0.32	+0.8
3,844,952	-		BT3036	0.32	-1.8