Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2669

Experiment: Bile salts 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.5 mg/ml
3,323,475	+				-0.3
3,323,475	+				-1.3
3,323,502	+				-0.8
3,323,657	-		BT2668	0.20	-0.1
3,323,755	+		BT2668	0.32	-0.8
3,323,756	-		BT2668	0.32	-1.7
3,323,759	+		BT2668	0.32	-0.9
3,323,765	-		BT2668	0.33	-2.0
3,323,765	-		BT2668	0.33	-1.4
3,323,767	+		BT2668	0.33	-0.5
3,323,768	-		BT2668	0.33	+0.7
3,323,803	+		BT2668	0.38	-0.4
3,323,971	+		BT2668	0.59	-0.9
3,324,004	+		BT2668	0.63	+0.8
3,324,004	+		BT2668	0.63	-1.3
3,324,067	+		BT2668	0.71	-1.0
3,324,067	+		BT2668	0.71	-0.5
3,324,080	+		BT2668	0.73	-0.5
3,324,086	+		BT2668	0.73	-0.5
3,324,087	-		BT2668	0.73	-0.9
3,324,163	+		BT2668	0.83	-0.6
3,324,215	-		BT2668	0.89	+0.2
3,324,224	+				+3.5
3,324,246	-				-0.9
3,324,264	-				-0.5
3,324,269	+				-0.1
3,324,298	+				-0.4
3,324,355	+				+0.5
3,324,369	+				+0.2
3,324,371	+				-0.1
3,324,371	+				-0.9
3,324,435	-				-0.5
3,324,444	+				+0.8
3,324,448	+				-1.6
3,324,449	-				+1.0
3,324,449	-				-0.2
3,324,462	+				-1.7
3,324,483	-				-0.3
3,324,483	-				+1.5
3,324,506	+		BT2669	0.12	+1.5
3,324,531	-		BT2669	0.18	+0.7
3,324,537	+		BT2669	0.19	-1.0
3,324,548	-		BT2669	0.22	+0.1
3,324,568	+		BT2669	0.26	-0.1
3,324,584	+		BT2669	0.30	+2.2
3,324,584	+		BT2669	0.30	+0.1
3,324,584	+		BT2669	0.30	-0.6
3,324,589	-		BT2669	0.31	+1.8
3,324,589	-		BT2669	0.31	-0.8
3,324,589	-		BT2669	0.31	-2.2
3,324,624	+		BT2669	0.39	+0.5
3,324,625	-		BT2669	0.39	-0.9
3,324,642	+		BT2669	0.43	-0.1
3,324,667	-		BT2669	0.49	-0.3
3,324,673	+		BT2669	0.50	-0.2
3,324,674	-		BT2669	0.50	+0.3
3,324,691	-		BT2669	0.54	-0.5
3,324,735	+		BT2669	0.64	+1.5
3,324,748	-		BT2669	0.67	+0.5
3,324,748	-		BT2669	0.67	-0.1
3,324,805	-		BT2669	0.80	-1.0
3,324,817	-		BT2669	0.82	-0.4
3,324,822	+		BT2669	0.84	+1.9
3,324,822	+		BT2669	0.84	+0.5
3,324,823	-		BT2669	0.84	-0.4
3,324,823	-		BT2669	0.84	-1.4
3,324,835	+		BT2669	0.86	-0.1
3,324,835	+		BT2669	0.86	-0.7
3,324,835	+		BT2669	0.86	+0.1
3,324,836	-		BT2669	0.87	+0.3
3,324,836	-		BT2669	0.87	-0.1
3,324,836	-		BT2669	0.87	-1.6
3,324,840	+		BT2669	0.88	+1.5
3,324,841	-		BT2669	0.88	-0.7
3,324,843	-		BT2669	0.88	-0.9
3,324,843	-		BT2669	0.88	-1.0
3,324,843	-		BT2669	0.88	+0.8
3,324,847	+		BT2669	0.89	+0.9
3,324,869	-				-1.0
3,324,869	-				-0.4
3,324,872	-				+0.1
3,324,872	-				-0.1
3,324,872	-				-1.7
3,324,872	-				-0.8
3,324,914	+				+0.5
3,324,915	-				+0.3
3,324,953	+				-0.4
3,324,954	-				-0.0
3,324,958	-				+1.5
3,324,987	-				+0.4
3,325,006	+				-0.8
3,325,007	-				-0.8
3,325,078	+				+0.4
3,325,079	-				+0.1
3,325,079	-				-0.7
3,325,128	+				-0.6
3,325,129	-				-0.1
3,325,129	-				-0.1
3,325,131	-				+0.1
3,325,155	-				+0.5
3,325,179	-				-0.2
3,325,199	-				-2.0