Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2569

Experiment: Bile salts 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.5 mg/ml
3,205,782	-		BT2568	0.41	-1.8
3,205,799	-		BT2568	0.42	-1.7
3,205,815	+		BT2568	0.44	+1.5
3,205,857	+		BT2568	0.47	-0.6
3,205,973	-		BT2568	0.56	-2.7
3,206,047	+		BT2568	0.62	-1.1
3,206,051	+		BT2568	0.63	-0.5
3,206,052	-		BT2568	0.63	-0.3
3,206,052	-		BT2568	0.63	-1.7
3,206,062	+		BT2568	0.64	-0.3
3,206,111	-		BT2568	0.68	-0.3
3,206,153	-		BT2568	0.71	-0.5
3,206,195	+		BT2568	0.74	-1.4
3,206,195	+		BT2568	0.74	+0.5
3,206,195	+		BT2568	0.74	+0.9
3,206,196	-		BT2568	0.75	-0.3
3,206,223	+		BT2568	0.77	-0.8
3,206,223	+		BT2568	0.77	-0.3
3,206,224	-		BT2568	0.77	+0.6
3,206,231	-		BT2568	0.77	-0.8
3,206,269	+		BT2568	0.80	-1.1
3,206,300	-		BT2568	0.83	+0.3
3,206,392	+				-0.5
3,206,458	+				-1.8
3,206,463	-				-1.5
3,206,480	+				-0.8
3,206,480	+				+0.5
3,206,509	+				-2.1
3,206,511	+				-1.2
3,206,552	+				+0.2
3,206,552	+				+1.0
3,206,560	-				-0.8
3,206,634	-				+0.9
3,206,760	+				-0.5
3,206,760	+				-0.4
3,206,791	+				-0.6
3,206,792	-				-0.1
3,206,812	+				-0.5
3,206,826	+		BT2569	0.12	-0.9
3,206,827	-		BT2569	0.13	-0.8
3,206,829	-		BT2569	0.13	+0.7
3,206,881	+		BT2569	0.23	-0.1
3,206,881	+		BT2569	0.23	+0.8
3,206,882	-		BT2569	0.24	-1.3
3,206,908	-		BT2569	0.29	-1.5
3,206,908	-		BT2569	0.29	+1.5
3,206,941	-				-0.5
3,206,941	-		BT2569	0.35	-1.2
3,206,941	-		BT2569	0.35	+0.5
3,207,100	+		BT2569	0.67	+0.9
3,207,101	-		BT2569	0.67	-0.5
3,207,101	-		BT2569	0.67	-0.1
3,207,101	-		BT2569	0.67	-0.2
3,207,123	+		BT2569	0.71	-0.1
3,207,206	-		BT2569	0.88	-0.3
3,207,288	-				+0.9
3,207,292	-				+0.1
3,207,298	+				-1.2
3,207,302	+				-0.1
3,207,302	+				-1.1
3,207,302	+				+0.5
3,207,303	-				-0.2
3,207,303	-				-0.1
3,207,303	-				-0.5
3,207,303	-				-0.7
3,207,304	+				-0.3
3,207,388	-				-1.5
3,207,412	-				-1.1
3,207,414	+				-1.1
3,207,425	+				-0.4
3,207,425	+				-1.0
3,207,430	+				-2.1
3,207,430	+				-1.9
3,207,431	-				-1.6
3,207,522	+				-0.3
3,207,522	+				-0.2
3,207,590	+				-1.6
3,207,590	+				-0.7
3,207,718	+		BT2570	0.13	-0.3
3,207,719	-		BT2570	0.13	-0.5
3,207,719	-		BT2570	0.13	+0.3
3,207,720	+		BT2570	0.13	-0.5
3,207,721	-		BT2570	0.13	-1.0
3,207,730	+		BT2570	0.14	-0.5
3,207,769	+		BT2570	0.17	-1.5
3,207,769	+		BT2570	0.17	-1.6
3,207,769	+		BT2570	0.17	-0.8
3,207,771	+		BT2570	0.17	+0.8
3,207,771	+		BT2570	0.17	-0.5
3,207,803	+		BT2570	0.19	+1.5
3,207,820	-		BT2570	0.20	-1.6
3,207,902	+		BT2570	0.26	+0.2
3,207,906	+		BT2570	0.26	-1.0
3,207,907	-		BT2570	0.26	+0.8
3,207,907	-		BT2570	0.26	-0.4
3,208,014	-		BT2570	0.34	-1.1
3,208,014	-		BT2570	0.34	+0.4
3,208,137	-		BT2570	0.42	+0.4
3,208,140	+		BT2570	0.42	+1.1
3,208,140	+		BT2570	0.42	-0.7
3,208,141	-		BT2570	0.43	+0.5
3,208,152	+		BT2570	0.43	-0.3
3,208,152	+				+1.5
3,208,152	+		BT2570	0.43	-0.1
3,208,208	-		BT2570	0.47	-0.3
3,208,226	-		BT2570	0.48	+0.6
3,208,237	-		BT2570	0.49	+0.8
3,208,244	+		BT2570	0.50	+0.4
3,208,244	+		BT2570	0.50	-1.2
3,208,245	-		BT2570	0.50	-1.0