Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2119

Experiment: Bile salts 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.5 mg/ml
2,666,566	+		BT2118	0.69	-1.2
2,666,624	+		BT2118	0.71	-0.3
2,666,730	+		BT2118	0.75	-0.4
2,666,798	-		BT2118	0.77	-0.5
2,666,798	-				-0.4
2,666,849	-		BT2118	0.78	-0.7
2,666,878	+		BT2118	0.79	-2.4
2,666,908	+		BT2118	0.80	-1.5
2,667,055	-		BT2118	0.85	-0.3
2,667,293	-				-0.2
2,667,296	+				-1.0
2,667,297	-				+0.6
2,667,310	+				+0.3
2,667,514	+				+1.6
2,667,574	+				+1.1
2,667,725	+		BT2119	0.19	-0.7
2,667,804	+		BT2119	0.26	+2.0
2,667,886	-		BT2119	0.34	+0.5
2,667,887	+		BT2119	0.34	-0.6
2,667,887	+		BT2119	0.34	-1.9
2,667,888	-		BT2119	0.34	-2.7
2,667,888	-		BT2119	0.34	+0.6
2,667,967	-		BT2119	0.41	+1.0
2,667,967	-		BT2119	0.41	-0.5
2,668,000	-		BT2119	0.44	+0.0
2,668,001	+		BT2119	0.44	-0.8
2,668,002	-		BT2119	0.44	+2.3
2,668,002	-		BT2119	0.44	-0.1
2,668,111	+		BT2119	0.55	-1.0
2,668,112	-		BT2119	0.55	+1.2
2,668,116	-		BT2119	0.55	-0.5
2,668,133	+		BT2119	0.57	+1.2
2,668,133	+		BT2119	0.57	+0.0
2,668,134	-		BT2119	0.57	-1.2
2,668,134	-		BT2119	0.57	-0.2
2,668,143	+		BT2119	0.58	-1.7
2,668,146	-		BT2119	0.58	+0.8
2,668,172	+		BT2119	0.60	-0.1
2,668,199	+		BT2119	0.63	-0.7
2,668,231	+		BT2119	0.66	+0.2
2,668,231	+		BT2119	0.66	-0.9
2,668,364	+		BT2119	0.78	+0.5
2,668,365	-		BT2119	0.78	-1.9
2,668,365	-		BT2119	0.78	-1.5
2,668,393	+		BT2119	0.81	+1.9
2,668,417	+		BT2119	0.83	-0.3
2,668,418	-		BT2119	0.83	-0.2
2,668,425	+		BT2119	0.84	-0.9
2,668,425	+		BT2119	0.84	+2.3
2,668,491	+				+0.6
2,668,613	+				+0.2
2,668,668	+				+0.4
2,668,798	+				-0.4
2,668,799	-				-1.4
2,668,807	+				-0.4
2,668,808	-				-1.2
2,668,809	+				-1.6
2,668,847	-				-0.4
2,668,851	+				-1.0
2,668,852	-				-1.6
2,668,855	+				-0.7
2,668,955	+		BT2120	0.20	-1.6
2,668,955	+		BT2120	0.20	+0.3
2,668,955	+		BT2120	0.20	+0.0
2,669,029	+		BT2120	0.29	-0.9
2,669,053	+		BT2120	0.32	-1.5
2,669,058	+		BT2120	0.32	-1.7
2,669,059	-		BT2120	0.32	-0.1
2,669,059	-		BT2120	0.32	-1.2
2,669,059	-		BT2120	0.32	-0.4
2,669,081	+		BT2120	0.35	-1.2
2,669,082	-		BT2120	0.35	-1.3
2,669,124	-		BT2120	0.40	-0.6
2,669,314	+		BT2120	0.62	-2.9
2,669,355	-				-0.4
2,669,355	-		BT2120	0.67	+0.0
2,669,355	-		BT2120	0.67	-0.7
2,669,389	+		BT2120	0.70	-0.7
2,669,476	-		BT2120	0.81	-0.8
2,669,479	+		BT2120	0.81	-1.4
2,669,480	-		BT2120	0.81	-0.2
2,669,480	-		BT2120	0.81	+1.6
2,669,480	-		BT2120	0.81	+0.4
2,669,569	+				-2.1
2,669,585	+				-1.6
2,669,589	+				+0.1
2,669,590	-				-0.7