Experiment: Formate/Acetate-Sulfate (60/30-30 mM) with Casaminos 0.05% without Molybdate/Tungstate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0682 and DVU0683 are separated by 328 nucleotides DVU0683 and hflK are separated by 1 nucleotides
DVU0682: DVU0682 - DNA-binding protein, putative (TIGR), at 756,252 to 756,950
DVU0682
DVU0683: DVU0683 - hflC protein, putative (TIGR), at 757,279 to 758,130
DVU0683
DVU0684: hflK - hflK protein, putative (TIGR), at 758,132 to 759,238
hflK
Position (kb) 757
758
759 Strain fitness (log2 ratio) -2
-1
0
1 at 756.313 kb on + strand at 756.331 kb on - strand, within DVU0682 at 756.411 kb on - strand, within DVU0682 at 756.520 kb on + strand, within DVU0682 at 756.621 kb on - strand, within DVU0682 at 756.621 kb on - strand, within DVU0682 at 756.645 kb on + strand, within DVU0682 at 756.724 kb on - strand, within DVU0682 at 756.724 kb on - strand, within DVU0682 at 756.724 kb on - strand, within DVU0682 at 756.746 kb on - strand, within DVU0682 at 756.750 kb on + strand, within DVU0682 at 756.826 kb on + strand, within DVU0682 at 756.828 kb on - strand, within DVU0682 at 756.893 kb on + strand at 756.903 kb on - strand at 756.991 kb on - strand at 756.991 kb on - strand at 757.009 kb on - strand at 757.359 kb on + strand at 757.359 kb on + strand at 757.408 kb on - strand, within DVU0683 at 757.408 kb on - strand, within DVU0683 at 757.417 kb on + strand, within DVU0683 at 757.427 kb on + strand, within DVU0683 at 757.433 kb on + strand, within DVU0683 at 757.441 kb on - strand, within DVU0683 at 757.484 kb on + strand, within DVU0683 at 757.623 kb on - strand, within DVU0683 at 757.674 kb on + strand, within DVU0683 at 757.682 kb on - strand, within DVU0683 at 757.772 kb on + strand, within DVU0683 at 757.790 kb on + strand, within DVU0683 at 757.795 kb on + strand, within DVU0683 at 757.821 kb on - strand, within DVU0683 at 757.885 kb on - strand, within DVU0683 at 757.897 kb on + strand, within DVU0683 at 757.905 kb on - strand, within DVU0683 at 758.036 kb on - strand, within DVU0683 at 758.057 kb on - strand at 758.099 kb on + strand at 758.107 kb on - strand at 758.133 kb on - strand at 758.161 kb on - strand at 758.200 kb on - strand at 758.272 kb on + strand, within hflK at 758.305 kb on - strand, within hflK at 758.324 kb on - strand, within hflK at 758.456 kb on - strand, within hflK at 758.500 kb on - strand, within hflK at 758.529 kb on - strand, within hflK at 758.574 kb on - strand, within hflK at 758.600 kb on - strand, within hflK at 758.647 kb on - strand, within hflK at 758.700 kb on - strand, within hflK at 758.719 kb on + strand, within hflK at 758.774 kb on + strand, within hflK at 758.802 kb on - strand, within hflK at 758.864 kb on - strand, within hflK at 758.927 kb on - strand, within hflK at 758.950 kb on - strand, within hflK at 759.052 kb on + strand, within hflK
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfate (60/30-30 mM) with Casaminos 0.05% without Molybdate/Tungstate remove 756,313 + -0.0 756,331 - DVU0682 0.11 -1.1 756,411 - DVU0682 0.23 +0.2 756,520 + DVU0682 0.38 -0.4 756,621 - DVU0682 0.53 -0.4 756,621 - DVU0682 0.53 -0.8 756,645 + DVU0682 0.56 -1.5 756,724 - DVU0682 0.68 -0.9 756,724 - DVU0682 0.68 -0.5 756,724 - DVU0682 0.68 -0.6 756,746 - DVU0682 0.71 +0.1 756,750 + DVU0682 0.71 -0.8 756,826 + DVU0682 0.82 +0.1 756,828 - DVU0682 0.82 -0.4 756,893 + +1.1 756,903 - -0.9 756,991 - -0.9 756,991 - -0.0 757,009 - -0.2 757,359 + +0.1 757,359 + -0.5 757,408 - DVU0683 0.15 -0.1 757,408 - DVU0683 0.15 +1.0 757,417 + DVU0683 0.16 +0.5 757,427 + DVU0683 0.17 -0.0 757,433 + DVU0683 0.18 +0.8 757,441 - DVU0683 0.19 -0.1 757,484 + DVU0683 0.24 +0.2 757,623 - DVU0683 0.40 -0.0 757,674 + DVU0683 0.46 +0.2 757,682 - DVU0683 0.47 +0.1 757,772 + DVU0683 0.58 -0.3 757,790 + DVU0683 0.60 +1.1 757,795 + DVU0683 0.61 -0.2 757,821 - DVU0683 0.64 +0.3 757,885 - DVU0683 0.71 +0.9 757,897 + DVU0683 0.73 +0.6 757,905 - DVU0683 0.73 -0.5 758,036 - DVU0683 0.89 -0.5 758,057 - +0.6 758,099 + +0.5 758,107 - -0.3 758,133 - -0.2 758,161 - -0.0 758,200 - +0.3 758,272 + hflK DVU0684 0.13 +0.3 758,305 - hflK DVU0684 0.16 +0.3 758,324 - hflK DVU0684 0.17 +0.4 758,456 - hflK DVU0684 0.29 +0.1 758,500 - hflK DVU0684 0.33 +0.3 758,529 - hflK DVU0684 0.36 +0.8 758,574 - hflK DVU0684 0.40 -1.9 758,600 - hflK DVU0684 0.42 +0.9 758,647 - hflK DVU0684 0.47 -0.1 758,700 - hflK DVU0684 0.51 +0.5 758,719 + hflK DVU0684 0.53 -0.7 758,774 + hflK DVU0684 0.58 -0.3 758,802 - hflK DVU0684 0.61 -0.3 758,864 - hflK DVU0684 0.66 +0.0 758,927 - hflK DVU0684 0.72 -0.7 758,950 - hflK DVU0684 0.74 +0.4 759,052 + hflK DVU0684 0.83 -0.0
Or see this region's nucleotide sequence