Experiment: Formate with EDTA 3.9 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS04285 and MMP_RS04290 are separated by 8 nucleotides MMP_RS04290 and MMP_RS04295 are separated by 90 nucleotides
MMP_RS04285: MMP_RS04285 - Ni/Fe hydrogenase subunit alpha, at 816,716 to 818,131
_RS04285
MMP_RS04290: MMP_RS04290 - 4Fe-4S binding protein, at 818,140 to 819,333
_RS04290
MMP_RS04295: MMP_RS04295 - CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein, at 819,424 to 821,388
_RS04295
Position (kb) 818
819
820 Strain fitness (log2 ratio) -2
-1
0
1 at 817.417 kb on - strand, within MMP_RS04285 at 817.417 kb on - strand, within MMP_RS04285 at 817.422 kb on + strand, within MMP_RS04285 at 817.527 kb on + strand, within MMP_RS04285 at 817.640 kb on - strand, within MMP_RS04285 at 817.644 kb on + strand, within MMP_RS04285 at 817.752 kb on - strand, within MMP_RS04285 at 817.752 kb on - strand, within MMP_RS04285 at 817.782 kb on - strand, within MMP_RS04285 at 817.968 kb on - strand, within MMP_RS04285 at 818.170 kb on + strand at 818.262 kb on + strand, within MMP_RS04290 at 818.301 kb on + strand, within MMP_RS04290 at 818.367 kb on - strand, within MMP_RS04290 at 818.506 kb on + strand, within MMP_RS04290 at 818.631 kb on - strand, within MMP_RS04290 at 818.674 kb on + strand, within MMP_RS04290 at 818.766 kb on - strand, within MMP_RS04290 at 818.850 kb on - strand, within MMP_RS04290 at 818.927 kb on - strand, within MMP_RS04290 at 818.972 kb on - strand, within MMP_RS04290 at 819.115 kb on + strand, within MMP_RS04290 at 819.177 kb on + strand, within MMP_RS04290 at 819.448 kb on - strand at 819.621 kb on + strand, within MMP_RS04295 at 819.657 kb on - strand, within MMP_RS04295 at 819.658 kb on + strand, within MMP_RS04295 at 819.789 kb on + strand, within MMP_RS04295 at 819.987 kb on + strand, within MMP_RS04295 at 820.141 kb on - strand, within MMP_RS04295 at 820.194 kb on - strand, within MMP_RS04295 at 820.195 kb on + strand, within MMP_RS04295
Per-strain Table
Position Strand Gene LocusTag Fraction Formate with EDTA 3.9 mM remove 817,417 - MMP_RS04285 0.50 +0.2 817,417 - MMP_RS04285 0.50 -0.5 817,422 + MMP_RS04285 0.50 +0.2 817,527 + MMP_RS04285 0.57 +0.2 817,640 - MMP_RS04285 0.65 -0.6 817,644 + MMP_RS04285 0.66 -0.5 817,752 - MMP_RS04285 0.73 -0.1 817,752 - MMP_RS04285 0.73 +0.4 817,782 - MMP_RS04285 0.75 -0.7 817,968 - MMP_RS04285 0.88 +0.6 818,170 + -0.1 818,262 + MMP_RS04290 0.10 +0.6 818,301 + MMP_RS04290 0.13 +0.0 818,367 - MMP_RS04290 0.19 -2.0 818,506 + MMP_RS04290 0.31 -0.2 818,631 - MMP_RS04290 0.41 -0.1 818,674 + MMP_RS04290 0.45 -0.7 818,766 - MMP_RS04290 0.52 -0.4 818,850 - MMP_RS04290 0.59 -0.7 818,927 - MMP_RS04290 0.66 -0.1 818,972 - MMP_RS04290 0.70 -0.4 819,115 + MMP_RS04290 0.82 -0.1 819,177 + MMP_RS04290 0.87 -0.3 819,448 - +0.3 819,621 + MMP_RS04295 0.10 -0.2 819,657 - MMP_RS04295 0.12 +0.0 819,658 + MMP_RS04295 0.12 +0.3 819,789 + MMP_RS04295 0.19 -0.4 819,987 + MMP_RS04295 0.29 -0.2 820,141 - MMP_RS04295 0.36 -0.1 820,194 - MMP_RS04295 0.39 -0.3 820,195 + MMP_RS04295 0.39 +0.7
Or see this region's nucleotide sequence